Gene Pmen_2793 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_2793 
Symbol 
ID5107589 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp3073319 
End bp3073663 
Gene Length345 bp 
Protein Length114 aa 
Translation table11 
GC content68% 
IMG OID640504043 
Productflagellar protein FhlB-like protein 
Protein accessionYP_001188280 
Protein GI146307815 
COG category[S] Function unknown 
COG ID[COG2257] Uncharacterized homolog of the cytoplasmic domain of flagellar protein FhlB 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.48705 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value0.231466 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCGCA AGAGCAGTAA GGCGGAACCG CGCCAGGCCA TCGCCCTCAA CTACGACGGG 
CAGAATGCTC CCGTGCTCAG CGCCAAGGGC GACGACGAAC TGGCCGAGGC CATCCTCGCC
ATCGCCCGCG AGTACGAGGT CCCGATCTAC GAGAATGCCG AGCTGGTGCG CCTGCTGGCC
CGCCTGGAGC TGGGCGACGC CATTCCCGAA GCGCTGTACC GCTGCATTGC CGAGATCATC
GCCTTCGCCT GGTACCTGCA GGGCAAGACC CCGCCCGGCT TCGAGGCGGA CAAAGAGCGC
GACGTCACCC CGCCGCCGGC GCTGCTCAGA GGTCCGAGGA GCTGA
 
Protein sequence
MSRKSSKAEP RQAIALNYDG QNAPVLSAKG DDELAEAILA IAREYEVPIY ENAELVRLLA 
RLELGDAIPE ALYRCIAEII AFAWYLQGKT PPGFEADKER DVTPPPALLR GPRS