12 homologs were found in PanDaTox collection
for query gene Pmen_2782 on replicon NC_009439
Organism: Pseudomonas mendocina ymp



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009439  Pmen_2782  hypothetical protein  100 
 
 
121 aa  242  1.9999999999999999e-63  Pseudomonas mendocina ymp  Bacteria  normal  0.981039  normal  0.95643 
 
 
-
 
NC_002947  PP_4319  hypothetical protein  44.7 
 
 
138 aa  106  1e-22  Pseudomonas putida KT2440  Bacteria  normal  0.860691  normal 
 
 
-
 
NC_009512  Pput_1549  hypothetical protein  44.7 
 
 
138 aa  106  1e-22  Pseudomonas putida F1  Bacteria  normal  0.51035  normal 
 
 
-
 
NC_010322  PputGB1_3887  hypothetical protein  45.11 
 
 
138 aa  104  4e-22  Pseudomonas putida GB-1  Bacteria  normal  normal 
 
 
-
 
NC_010501  PputW619_3644  hypothetical protein  45.19 
 
 
139 aa  104  4e-22  Pseudomonas putida W619  Bacteria  normal  0.0205183  normal 
 
 
-
 
NC_009656  PSPA7_3843  putative lipoprotein  51.69 
 
 
137 aa  104  5e-22  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_3626  lipoprotein, putative  41.98 
 
 
135 aa  101  3e-21  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_008463  PA14_45260  hypothetical protein  57.14 
 
 
144 aa  99.8  1e-20  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_007005  Psyr_3384  putative lipoprotein  42.64 
 
 
135 aa  93.6  9e-19  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.112381  normal 
 
 
-
 
NC_007492  Pfl01_1586  hypothetical protein  38.64 
 
 
135 aa  90.5  7e-18  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.189764  normal 
 
 
-
 
NC_012560  Avin_30360  hypothetical protein  44.66 
 
 
155 aa  85.5  2e-16  Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
-
 
NC_009439  Pmen_3121  hypothetical protein  47.54 
 
 
108 aa  52  0.000003  Pseudomonas mendocina ymp  Bacteria  normal  0.310321  normal  0.0170994 
 
 
-
 
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