Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_2720 |
Symbol | |
ID | 5107871 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | - |
Start bp | 2984716 |
End bp | 2985828 |
Gene Length | 1113 bp |
Protein Length | 370 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640503964 |
Product | aspartate-semialdehyde dehydrogenase |
Protein accession | YP_001188207 |
Protein GI | 146307742 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0136] Aspartate-semialdehyde dehydrogenase |
TIGRFAM ID | [TIGR01745] aspartate-semialdehyde dehydrogenase, gamma-proteobacterial |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.0630746 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 0.0525607 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACGTG TAGGTCTGAT CGGTTGGCGT GGCATGGTCG GTTCCGTGCT CATGCAGCGC ATGCTGGAAG AGCGGGACTT CGACCTGATC GAGCCGGTGT TCTTCACCAC CTCCAATGTC GGTGGCCAGG GTCCTGCCAT TGGCAAGGAC ATTGCCCCGC TGAAGGACGC CTACAGCATC GAAGACCTGA AAGGCCTGGA CGTGATCCTG ACCTGCCAGG GCGGCGACTA CACCAACGAA GTCTTCCCCA AGCTGCGCGA AGCCGGCTGG CAGGGCTACT GGATCGATGC CGCCTCGTCG CTGCGCATGG ACGACGGTGC GGTGATCGTG CTCGACCCGG TCAACCGCAA GGTGATCGAC CAGGCGCTGG ACGCCGGCAC CAAGAACTAC ATCGGCGGCA ACTGCACCGT CAGCCTGATG CTGATGGCCC TCGGTGGTCT GTACGAAGCC GGTCTGGTCG AGTGGATGAG CGCCATGACC TACCAGGCGG CCTCGGGTGC CGGTGCGCAG AACATGCGCG AGCTGATCAA GCAGATGGGC GCGATCAACG GTGCCGTCGC CGATGAACTG GCCGATCCGG CTAGTGCCAT TCTCGACATC GACCGCAAGG TGGCCGAAGC CATGCGCGGC GAGGCCTTCC CGGTGGACAA CTTCGGCGTG CCGCTGGCCG GCAGTCTGAT CCCCTACATC GACAAGGAGC TGCCCAACGG GCAGAGCCGT GAGGAGTGGA AGGCCCAGGC CGAAACCAAC AAGATCCTCG GCCGCTTCAA GAGCCCGATC CCGGTCGATG GCATCTGCGT GCGCATCGGC GCCATGCGTT GCCACAGCCA GGCGCTGACC ATCAAGCTGA ACAAGGATGT GCCGATGGCC GACATCGAAG GCCTGATCAG CCAGCACAAC CCCTGGGTCA AGCTGGTGCC GAACCACCGC GAAGACTCCA TCCGTGACCT CGGCCCGACT GCCGTTACCG GTACCCTGAG CGTGCCGGTC GGTCGCCTGC GCAAGCTCAA CATGGGCTCG CAGTACCTCG GCGCCTTCAC CGTCGGTGAC CAACTGCTGT GGGGCGCCGC CGAGCCGCTG CGCCGCATGC TGCGGATCCT GCTGGAGCGC TAA
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Protein sequence | MKRVGLIGWR GMVGSVLMQR MLEERDFDLI EPVFFTTSNV GGQGPAIGKD IAPLKDAYSI EDLKGLDVIL TCQGGDYTNE VFPKLREAGW QGYWIDAASS LRMDDGAVIV LDPVNRKVID QALDAGTKNY IGGNCTVSLM LMALGGLYEA GLVEWMSAMT YQAASGAGAQ NMRELIKQMG AINGAVADEL ADPASAILDI DRKVAEAMRG EAFPVDNFGV PLAGSLIPYI DKELPNGQSR EEWKAQAETN KILGRFKSPI PVDGICVRIG AMRCHSQALT IKLNKDVPMA DIEGLISQHN PWVKLVPNHR EDSIRDLGPT AVTGTLSVPV GRLRKLNMGS QYLGAFTVGD QLLWGAAEPL RRMLRILLER
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