| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_2695 |
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| Symbol | |
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| ID | 5107846 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 2956414 |
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| End bp | 2957238 |
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| Gene Length | 825 bp |
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| Protein Length | 274 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640503939 |
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| Product | short chain dehydrogenase |
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| Protein accession | YP_001188182 |
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| Protein GI | 146307717 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.18208 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 0.175359 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCACTTT CCGGCAAGAC CCTGTTCATC ACCGGCGCCA GCCGTGGCAT CGGCCGCGAG
ATCGCCCTCA AGGCCGCCGC CGATGGTGCC AATATCGTCA TCGCGGCCAA GAGCGCCGAG
CCACACCCGA AGCTGGCGGG TACCATCCAC AGCGTCGCCG CCGAAGTCGA AGCCGCTGGC
GGCAAGGCAC TGGCCCTGCA GCTGGATGTG CGCGATGAGC AGGCCGTGGC GGCCGCCATG
GCCCGCGCAG CCGAGCATTT CGGCGGTATC GATGCCCTGG TCAACAATGC CGGGGCCATT
AAGCTGGTGG GTGTGGAGAA GCTCGAACCG AAGCGCTTCG ACCTGATGTA TCAGATCAAC
ACTCGCGCGG TGATGGTCTG CAGCCAGGCA GCGCTGCCTT ACCTGAAACA GAGCGCCAGC
GGGCATATCC TCAACCTCTC CCCGCCGCTC AACCTCGACA CCAAGTGGTT CGCCCAGCAC
GGCCCCTACA CCGTCACCAA GTACGGCATG AGCATGCTCA CCCTGGGCAT GAGCGAGGAG
TTCAAGAAGT ACGGCATCAG CGTCAATTCG CTGTGGCCAA AGACCATGAT CGCCACCGCG
GCCATCGAGT TCGAACTGGG CAGCCGCGAC GCCTTCAAGC GGGCGCGCAC GCCGGCCATC
ATGGCCGATG CGGCCCACGC CATCCTCAGC AGCGGAGGCC GCAGCCTCAC CGGGCGCCTG
CTGATCGACG AGGACATCCT GCGTGAACGG GGCGTCAGCG ACTTCGAGCA GTACCGCTTC
GATCCTGCTG GCGGCAGCCT GGTGCCCGAC CTGTTCGTCG ACTGA
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| Protein sequence | MSLSGKTLFI TGASRGIGRE IALKAAADGA NIVIAAKSAE PHPKLAGTIH SVAAEVEAAG
GKALALQLDV RDEQAVAAAM ARAAEHFGGI DALVNNAGAI KLVGVEKLEP KRFDLMYQIN
TRAVMVCSQA ALPYLKQSAS GHILNLSPPL NLDTKWFAQH GPYTVTKYGM SMLTLGMSEE
FKKYGISVNS LWPKTMIATA AIEFELGSRD AFKRARTPAI MADAAHAILS SGGRSLTGRL
LIDEDILRER GVSDFEQYRF DPAGGSLVPD LFVD
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