| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_2671 |
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| Symbol | |
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| ID | 5107822 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 2930195 |
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| End bp | 2931352 |
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| Gene Length | 1158 bp |
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| Protein Length | 385 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640503915 |
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| Product | GntR family transcriptional regulator |
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| Protein accession | YP_001188158 |
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| Protein GI | 146307693 |
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| COG category | [E] Amino acid transport and metabolism
[K] Transcription |
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| COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.584535 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCTTCT CCGAACGCAT CGCCCGCCTG AAAAGCTCCC TGATCCGTGA AATTCTCGCC
GCGGCGCAGC GTCCGGAGGT GATGTCCTTC GCCGGTGGGC TGCCGGCCGA GCCGATGCTG
CCGAAGGTGG ACTGGGCCGA GATGCCGGCG AGCATGGGCC AGTACGGCAT GAGCGAGGGC
GAGCCGGCGC TGCGTGAAGC CATCGCTGCC GAGGCGCGGG CTCTGGGCGT GCCCTGCGAG
GCCAGCCAGG TGCTGATCGT CAGCGGCTCG CAGCAGACGC TGGATCTGGC CTCCAAGCTG
TTTATCGATC CGGGCACCGA GGTGCTGCTC GAGGCGCCGA CCTACCTGGC CGCGCTGCAG
GCCTTCCAGC TGTTCGGCGC CGCTTGCATC AGCGTGCCGC AGGAGGCCGA TGGCCCCGAG
CTGGCCGCGC TGCGCCAGCG TCTGGAGAAG CACAAGCCGG CTTTCGCCTA CCTGATTCCG
ACCTTCCAGA ACCCGTCCGG CACCCGTTAC AGCGAAGCCA AGCGCGAAGC GGTGGCGGCG
CTGCTCGACG AGTTCGGCGT GACCCTGATC GAGGACGAGC CGTACCGCGA GCTGGTGTTC
GACGCCGGCA GCGCCACGCC CATTGTCAGC CGCCTGCAGA AGGCCAGCTG GATCTACACC
GGCACCGTAT CCAAGACCCT GCTGCCGGGC CTGCGCGTCG GCTACCTGAT CGCCACCAAG
GACCTGTACC CGCACCTGCT GCGCCTGAAG CAGTCGGCCG ACCTGCACAC CAACCGCATC
GGTCAGTGGC AGGCGCTGCA GTGGCTGGGC AGCGAGCAGT ACCGTGGCCA CCTGGCCGAG
CTGCGCGATT TCTACCGCAT CCGCCGCGAC GCCATGCAGA CCGCGCTGCT GGAGCACTTC
GGCGAGCTGG CCGACTGGCA GATCCCGCAG GGCGGCCTGT TCTTCTGGCT GACCCTCAAG
CAGCCGCTGG ACACCCGCAC GCTGCTCGAT GCGGCGCTGG CGCAGAACGT CGCCTTCATG
CCGGGCGAGC CGTTCTTCAT CGACCCGGAT GCCAACCCCG GCCACCTGCG ACTGAACTTC
AGCCATGTGG CGCCGGAGCG CCTGGGTGAG GGGCTGCGCC GACTGGCGGC GGTGATTCGA
GAGGCGCAGG CGAAGTAG
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| Protein sequence | MAFSERIARL KSSLIREILA AAQRPEVMSF AGGLPAEPML PKVDWAEMPA SMGQYGMSEG
EPALREAIAA EARALGVPCE ASQVLIVSGS QQTLDLASKL FIDPGTEVLL EAPTYLAALQ
AFQLFGAACI SVPQEADGPE LAALRQRLEK HKPAFAYLIP TFQNPSGTRY SEAKREAVAA
LLDEFGVTLI EDEPYRELVF DAGSATPIVS RLQKASWIYT GTVSKTLLPG LRVGYLIATK
DLYPHLLRLK QSADLHTNRI GQWQALQWLG SEQYRGHLAE LRDFYRIRRD AMQTALLEHF
GELADWQIPQ GGLFFWLTLK QPLDTRTLLD AALAQNVAFM PGEPFFIDPD ANPGHLRLNF
SHVAPERLGE GLRRLAAVIR EAQAK
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