| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_2657 |
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| Symbol | |
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| ID | 5107966 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 2914441 |
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| End bp | 2915841 |
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| Gene Length | 1401 bp |
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| Protein Length | 466 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 640503901 |
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| Product | outer membrane efflux protein |
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| Protein accession | YP_001188144 |
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| Protein GI | 146307679 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.0763881 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 47 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCACCA TTAAACCCGC CGTACTGCTC TGTGCCGCGC TGCTGCTGGC CGGCTGCGCC
GGCTTCAGCC GGGACGGCGG CTTCGACCTG GTGCAGCAAA GCGCCGAGCG CCAGCTGGAC
AAGCAACTGC TGTGGGCGCG CGACGAGGCC GGCCGTGGCC AGATCGAGGC GCGCGTCGCC
GAGCTGCTGG CCGAACCCCT GAGCCTGGAC GCCGCAGTGC AGCTGGCGCT GCTCAACAAC
CGTGGTCTGC AGGCGTCCTT CGACGAGCTG GGCATCGGCG AGGCCGAGCG CGTGCAGGCC
GGGCGCCTGC CCAATCCCGG CTTCTCCTAT GGCCGTCTGG AAAAGGGCAG CGAGGTCGAA
TACGAGCGCG GCCTGCACCT GAATCTGGCG CGGCTGATCG CCCTGCCGCT GTCCTCGCGC
CTGGAAGGTC GGCGCTTCGA GCAGCTGCAG CGGCAGACCA GCCTGGCGGT GTTCGACCTG
GCCAGCGAGA CGCGCAAGGC CTGGTACCAG GCGGTCGCCG CCGAGGAGAG CCTGGTCTAC
GCGCGGCAGG TGCTGGACGC CGCCGAAGCC GGCGCCGAGC TGGCCCGGCG CCTGGCCGCG
GTGGGCAACT TCAGCAAGCT GCAGCAGGCC GAGCAGCAGA ACTTCTACGC CGAGGCCGGC
ATCGGTCTGT TGCAGGCCGA ACAGGCGCGG GTGCGCAGCC GCGAGCAGCT GACCCGTCTG
CTCGGCCTGT GGGGCGAGCA GCTCGACTAC CGCCTGCCCG AACGCCTGCC GGCGCTGCCT
AAAACCGCGG ACGAGTTGCC GGACGTGGAG CGCCTGGCCA TGAACCAGCG CCAGGACATC
CAGGCCGTGC GCCTGGATGC CGAGCGCCTG GCGCAGAACC TCGGCCTGAC CCGCACCACG
CGTTTCATCA ACGTGCTGGA GCTGGGCGTG GTCAACAACC GTTCCAACGA GGAGCCGACC
CAGCGCGGCT ACGAGATCAG CATCGAGCTG CCGCTGTTCG ACTGGAGCGG TGCCAAGGTG
GCGCGGGCCG AGGCGCAGTA TCGCCAGGCG CTCAACCGCG CCGCGGAGAC GGCGATCAAC
GCCCGCTCGC AGGTGCGCGA GGCCTATCAC GCCTACCGCA ACGCCTTCGA GCTGGCGCAG
CACTACCGCA CCGAGGTGCT GCCGCTGCGC CAGCGCATCG CCGAGGAAAA CCTGCTGCGC
TACAACGGCA TGTTCATCAG CACCTTCGAC CTGCTCGCCG ATGCGCGCCG CCAGGTGCAG
GCGGTGGATG GCTACCTGCA GGCGCAGCGC GCCTTCTGGC TGGCGCGCGC CGACCTCGAC
ATGGCCCTGT TGGGCGCCCC CAATCCCTCG CTCGGCGCGG CGCCTGCCGC TGCTGCCGAG
CCGGCCGCCG CCGGCCACTG A
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| Protein sequence | MTTIKPAVLL CAALLLAGCA GFSRDGGFDL VQQSAERQLD KQLLWARDEA GRGQIEARVA
ELLAEPLSLD AAVQLALLNN RGLQASFDEL GIGEAERVQA GRLPNPGFSY GRLEKGSEVE
YERGLHLNLA RLIALPLSSR LEGRRFEQLQ RQTSLAVFDL ASETRKAWYQ AVAAEESLVY
ARQVLDAAEA GAELARRLAA VGNFSKLQQA EQQNFYAEAG IGLLQAEQAR VRSREQLTRL
LGLWGEQLDY RLPERLPALP KTADELPDVE RLAMNQRQDI QAVRLDAERL AQNLGLTRTT
RFINVLELGV VNNRSNEEPT QRGYEISIEL PLFDWSGAKV ARAEAQYRQA LNRAAETAIN
ARSQVREAYH AYRNAFELAQ HYRTEVLPLR QRIAEENLLR YNGMFISTFD LLADARRQVQ
AVDGYLQAQR AFWLARADLD MALLGAPNPS LGAAPAAAAE PAAAGH
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