| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_2625 |
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| Symbol | |
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| ID | 5107935 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 2885814 |
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| End bp | 2886545 |
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| Gene Length | 732 bp |
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| Protein Length | 243 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640503869 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001188113 |
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| Protein GI | 146307648 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 0.720898 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGAGA ACAAGAAGGT CGCCTTGATC ATCGGCGCCG GCGACGCCAC CGGTGGTGCC
ATTGCCCGGC GTTTTGCCCG TGAGGGCTAT GTGGCCTGCG TTACCCGCCG CAGCCTGGAC
AAGCTGCAGC CGCTGCTGGA GGACATCCGC AGCGCAGGCG GCGAGGCCCA TGGTTTTGCC
TCCGATGCGC GGCGCGAGGA GCAGGTGGCC GAGCTGGTCG AAGGCATCGA GCGTGACATC
GGCCCCATTG AGGTGATGGT GTTCAACATC GGCGCCAACG TGCCGTGCAG CATTCTCGAA
GAAACCGCGC GCAAGTATTT CAAAATCTGG GAAATGGCCT GCTTCGCCGG TTTTCTCACC
AGCCAGGCGG TGGCCAAGCG CATGGTCGCG CGCGGACGCG GCACCATCCT GTTCACCGGT
GCCACGGCCG GGCTGCGTGG CGCCGCCGGA TTCGCCGCCT TTGCCGGCGC CAAGCACGGC
ATACGCGCGC TGGCGCAGAG CATGGCGCGC GAGCTGGGAC CGCTGAATAT CCATGTCGCC
CATGTGGTGG TGGACGGCGC CATCGATACC GCCTTCATCC GCGACAGCTT TCCCGAGCTG
TACGCCAGGA AGGATCAGGA TGGCATTCTC GATCCCGAGC ATATCGCCGA CAGCTACTGG
TTCCTGCACG CTCAGCCGCG CGACGCCTGG ACCTTCGAGC TGGATCTGCG TCCATGGATC
GAGCGCTGGT AA
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| Protein sequence | MSENKKVALI IGAGDATGGA IARRFAREGY VACVTRRSLD KLQPLLEDIR SAGGEAHGFA
SDARREEQVA ELVEGIERDI GPIEVMVFNI GANVPCSILE ETARKYFKIW EMACFAGFLT
SQAVAKRMVA RGRGTILFTG ATAGLRGAAG FAAFAGAKHG IRALAQSMAR ELGPLNIHVA
HVVVDGAIDT AFIRDSFPEL YARKDQDGIL DPEHIADSYW FLHAQPRDAW TFELDLRPWI
ERW
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