Gene Pmen_2623 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_2623 
Symbol 
ID5107933 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp2884915 
End bp2885130 
Gene Length216 bp 
Protein Length71 aa 
Translation table11 
GC content64% 
IMG OID640503867 
Producthypothetical protein 
Protein accessionYP_001188111 
Protein GI146307646 
COG category[S] Function unknown 
COG ID[COG3530] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value0.82833 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCCCG AAGCGCTGAA ACTCCTGGTG ACCCGCCGCA TGCCCTACGG CAAGTACAAG 
GACCGGCTGA TCGCCGACCT GCCGGGCCAT TACCTCAACT GGTTCGCCCG CACAGGGTTT
CCCAAGGGCG AATTGGGCCG GCTGCTCGCG CTGATGCAGG AGATCGACCA CAACGGCCTC
AAGCCGCTGC TCGATCCGTT GCGCGACCGT TCGTAG
 
Protein sequence
MNPEALKLLV TRRMPYGKYK DRLIADLPGH YLNWFARTGF PKGELGRLLA LMQEIDHNGL 
KPLLDPLRDR S