Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_2596 |
Symbol | |
ID | 5107906 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | - |
Start bp | 2859785 |
End bp | 2860735 |
Gene Length | 951 bp |
Protein Length | 316 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640503840 |
Product | hypothetical protein |
Protein accession | YP_001188084 |
Protein GI | 146307619 |
COG category | [S] Function unknown |
COG ID | [COG2307] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.0574332 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 0.403817 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTTTCGA GAACTGCCTC CGATCTTTAC TGGATGTCGC GCTACCTGGA GCGCGCCGAG AACCTGGCGC GCATGCTCGA CGTCAGCTAT TCGCTGTCAC TGATGCCGCA GGACGGCCGT GGCGACGGTC TGGATGAACT GGCCATGCCG CTGCTCATCA CCGGCACCCT GGACGACTAC CTGGAGCGCC ACGGCCCGTT GCACGCCGAG CGCATGCTGC ACTTCTTCGC CCTTGATGTG AGCAACCCGG GCAGCATCTA CTGCTGCCTG CAGGCCGCGC GCAGCAACGC TCATGCGGTG CGCGGGCGGA TCACCGCGGA CATGTGGGAG AACATCAATG CCTCCTGGCT GGAGATGCGC GGCATCGCCG AGCAGGGGCT GGGGCGCTAC GGCATCAGCC GTTTCTGCGA GTGGGTCAAG GAGCGTTCGC ATCTGTTCCG CGGCGCTACC TTCGGCACCA TCATGCGTGG CGAGGCCTAC CGCTTCATTC GCCTGGGCAC CTTCATCGAG CGCGCCGACA ACACCCTGCG CCTGCTCGAT GCGCGCTACG AAATGCTCGG CGAGGAGATC GACGAACTGG AAGAGCGCAC CGCGCGCAGC TATTACCAGT GGAGTGCGCT GCTGCGTGCC CTGTCCTCGT TCGAGGCCTT CGCCGAGATC TATCGCGGCT CGCCGCGCAC GCGCAAGGTG GCCGAGCTGC TGCTGTTGCG CCCGGACGTG CCGCGTTCGC TGCGCGCCTG CCTGGAAGAA CTCAACCTGA TGCTTGCCGG CCTGCCCGGC GAGAACGGTC GCCCGGCGCA GCGTCTGGCC GCCGAGCTGG ATGCCCGCCT GCGTTACACC AGCATCGGCG AGGTGCTCGA CGAAGGCCTG CACGCCTGGC TCACCGACTT CATCCTGCTG GTGCGCCAGC TGGGCAACAC CATCCATACG TCCTACCTGG AGGTCGCATG A
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Protein sequence | MLSRTASDLY WMSRYLERAE NLARMLDVSY SLSLMPQDGR GDGLDELAMP LLITGTLDDY LERHGPLHAE RMLHFFALDV SNPGSIYCCL QAARSNAHAV RGRITADMWE NINASWLEMR GIAEQGLGRY GISRFCEWVK ERSHLFRGAT FGTIMRGEAY RFIRLGTFIE RADNTLRLLD ARYEMLGEEI DELEERTARS YYQWSALLRA LSSFEAFAEI YRGSPRTRKV AELLLLRPDV PRSLRACLEE LNLMLAGLPG ENGRPAQRLA AELDARLRYT SIGEVLDEGL HAWLTDFILL VRQLGNTIHT SYLEVA
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