Gene Pmen_2596 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_2596 
Symbol 
ID5107906 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp2859785 
End bp2860735 
Gene Length951 bp 
Protein Length316 aa 
Translation table11 
GC content66% 
IMG OID640503840 
Producthypothetical protein 
Protein accessionYP_001188084 
Protein GI146307619 
COG category[S] Function unknown 
COG ID[COG2307] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.0574332 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value0.403817 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTTCGA GAACTGCCTC CGATCTTTAC TGGATGTCGC GCTACCTGGA GCGCGCCGAG 
AACCTGGCGC GCATGCTCGA CGTCAGCTAT TCGCTGTCAC TGATGCCGCA GGACGGCCGT
GGCGACGGTC TGGATGAACT GGCCATGCCG CTGCTCATCA CCGGCACCCT GGACGACTAC
CTGGAGCGCC ACGGCCCGTT GCACGCCGAG CGCATGCTGC ACTTCTTCGC CCTTGATGTG
AGCAACCCGG GCAGCATCTA CTGCTGCCTG CAGGCCGCGC GCAGCAACGC TCATGCGGTG
CGCGGGCGGA TCACCGCGGA CATGTGGGAG AACATCAATG CCTCCTGGCT GGAGATGCGC
GGCATCGCCG AGCAGGGGCT GGGGCGCTAC GGCATCAGCC GTTTCTGCGA GTGGGTCAAG
GAGCGTTCGC ATCTGTTCCG CGGCGCTACC TTCGGCACCA TCATGCGTGG CGAGGCCTAC
CGCTTCATTC GCCTGGGCAC CTTCATCGAG CGCGCCGACA ACACCCTGCG CCTGCTCGAT
GCGCGCTACG AAATGCTCGG CGAGGAGATC GACGAACTGG AAGAGCGCAC CGCGCGCAGC
TATTACCAGT GGAGTGCGCT GCTGCGTGCC CTGTCCTCGT TCGAGGCCTT CGCCGAGATC
TATCGCGGCT CGCCGCGCAC GCGCAAGGTG GCCGAGCTGC TGCTGTTGCG CCCGGACGTG
CCGCGTTCGC TGCGCGCCTG CCTGGAAGAA CTCAACCTGA TGCTTGCCGG CCTGCCCGGC
GAGAACGGTC GCCCGGCGCA GCGTCTGGCC GCCGAGCTGG ATGCCCGCCT GCGTTACACC
AGCATCGGCG AGGTGCTCGA CGAAGGCCTG CACGCCTGGC TCACCGACTT CATCCTGCTG
GTGCGCCAGC TGGGCAACAC CATCCATACG TCCTACCTGG AGGTCGCATG A
 
Protein sequence
MLSRTASDLY WMSRYLERAE NLARMLDVSY SLSLMPQDGR GDGLDELAMP LLITGTLDDY 
LERHGPLHAE RMLHFFALDV SNPGSIYCCL QAARSNAHAV RGRITADMWE NINASWLEMR
GIAEQGLGRY GISRFCEWVK ERSHLFRGAT FGTIMRGEAY RFIRLGTFIE RADNTLRLLD
ARYEMLGEEI DELEERTARS YYQWSALLRA LSSFEAFAEI YRGSPRTRKV AELLLLRPDV
PRSLRACLEE LNLMLAGLPG ENGRPAQRLA AELDARLRYT SIGEVLDEGL HAWLTDFILL
VRQLGNTIHT SYLEVA