| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_2578 |
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| Symbol | |
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| ID | 5108045 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 2842030 |
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| End bp | 2844630 |
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| Gene Length | 2601 bp |
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| Protein Length | 866 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640503822 |
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| Product | bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase |
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| Protein accession | YP_001188066 |
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| Protein GI | 162286124 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1049] Aconitase B |
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| TIGRFAM ID | [TIGR00117] aconitate hydratase 2 |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.681546 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.00306665 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGCTTGAAG CCTATCGCAA ACACGTAGCA GAGCGTGCCG CTCAGGGTAT CGTGCCCCAG
CCGCTGAACG CCGAACAAAC CGCAGGCCTG GTCGAGCTGC TGAAAAACCC GCCGGCTGGC
GAAGAAGAAT TCCTCGTAGA CCTGATCACC AACCGTGTAC CGCCGGGCGT GGACGAAGCT
GCCTACGTCA AGGCCGGTTT CCTCTCTGCC ATCGCCAAGG GCGAAGCCAC TTCCCCGCTG
ATCAGCAAGC AACGCGCCGT CGAGCTGCTG GGCACCATGC AGGGCGGCTA CAACATCGCC
ACCCTGGTCG AACTGCTGGA CGACGCCACC CTGGGCGCCG TTGCCGCCGA GCAACTCAAG
CACACCCTGC TGATGTTCGA CGCCTTCCAC GACGTCGCCG AGAAAGCCAA GGCTGGCAAT
GCCAACGCCA AGGCCGTGCT GCAGTCCTGG GCCGATGGCG AGTGGTTCAC CAACAAGCCG
GCCATCGCCG AGAAGTACAG CCTGGCCGTG TTCAAGGTGC CTGGCGAAAC CAACACCGAC
GACCTCTCCC CCGCCCCGGA CGCCTGGTCG CGCCCTGACA TCCCGCTGCA CGCGCTGGCC
ATGCTGAAAA TGGCTCGCGA CGGCATCGTG CCGGAGCAGC AAGGCGCCAT CGGCCCGCTG
AAGCAGATCG AAGAGATCAA GGCCAAGGGC TTCCCGGTCG CCTACGTCGG TGACGTGGTC
GGTACCGGTT CTTCCCGCAA GTCCGCCACC AACTCGGTGC TGTGGTTCTT CGGCGACGAC
ATTCCGTACG TGCCGAACAA GCGCGCTGGC GGCTTCTGCT TCGGCACCAA GATCGCCCCG
ATCTTCTACA ACACCATGGA AGACGCCGGC GCCCTGCCGA TCGAGTTCGA CGTGTCGAAC
ATCAACATGG GCGACGTGAT CGACGTCTAC CCGTACGCCG GCAAGGTCTG CAAGCACGGC
ACCGACGAAG TCATCACCAC CTTCGAATTG AAGACCCCGG TGCTGCTCGA CGAAGTGCGC
GCTGGCGGCC GTATCCCGCT GATCGTCGGC CGTGGCCTGA CCGAGAAGGC GCGTGCCGAG
CTGGGCCTGG GCTCCTCCGA CCTGTTCAAG AAACCGGAGC AGCCGGCTGA CAGCGGCAAG
GGCTTCACCC TGGCGCAGAA GATGGTCGGC AAGGCCTGCG GCGTCGAAGG CGTACGTCCG
GGCACCTACT GCGAACCGAA GATGACCACC GTCGGCTCCC AGGACACCAC TGGCCCGATG
ACCCGTGACG AGCTGAAGGA CCTGGCTTGC CTGGGCTTCT CCGCCGACCT GGTGATGCAG
TCCTTCTGCC ACACCGCTGC TTATCCGAAG CCGATCGACG TCACCACCCA CCACACCCTG
CCGGATTTCA TCCGCACCCG TGGCGGCGTA TCCCTGCGTC CCGGCGACGG CATCATCCAC
AGCTGGCTGA ACCGCATGCT GCTGCCCGAC ACCGTCGGCA CCGGTGGCGA CTCGCACACC
CGCTTCCCGA TCGGCATTTC CTTCCCGGCC GGCTCCGGCC TGGTGGCCTT CGCCGCCGCC
ACCGGCGTGA TGCCGCTGGA CATGCCGGAA TCGGTTCTGG TGCGCTTCAA GGGCAAGATG
CAGCCGGGTA TCACCCTGCG TGACCTGGTC CACGCCATCC CCTACTACGC CATCCAGAAA
GGTCTGCTGA CCGTCGAGAA GAAAGGCAAG AAGAACATCT TCTCCGGCCG CATCCTCGAG
ATCGAAGGTC TGGACAACCT GACCGTCGAG CAGGCGTTCG AGCTGTCCGA CGCCTCCGCC
GAGCGTTCGG CTGCCGGTTG CACCATCAAG CTGCCGGAAA CGGCCATCGC CGAATACCTG
CAGTCCAACA TCACCCTGCT GCGCTGGATG ATCAGCGAAG GCTACGGCGA TGCCCGCACC
CTGGAGCGTC GTGCCCAGGC GATGGAAGCC TGGCTGGCCA ACCCGGTGCT GATGGAAGCC
GACAAGGACG CCGAGTACGC CGAAGTCATC GAAATCGACC TGGCCGAGCT CAAGGAGCCG
GTGCTGTGCG CCCCGAACGA CCCGGACGAC GCCCGTCTGC TGTCCACCGT GGCCGGCGAC
AAGATCGACG AAGTGTTCAT CGGTTCGTGC ATGACCAACA TCGGCCACTT CCGCGCTGCC
GGCAAGCTGC TGGACAAGGT CAAGGGCGGT ATCCCGACTC GTCTGTGGCT GTCGCCGCCG
ACCAAGATGG ACGCGCACCA GCTGACCGAG GAAGGCTACT ACGGCATCTA CGGCAAGGCC
GGTGCACGCA TGGAGATGCC GGGCTGCTCG CTGTGCATGG GTAACCAGGC ACGTGTGGCT
GCCAACTCCA CCGTGGTGTC GACCTCCACC CGTAACTTCC CGAACCGCCT GGGCGATGGC
GCCAACGTGT ACCTGGCCTC TGCCGAACTG GCGGCAGTCG CTTCGATTCT CGGCAAGCTG
CCGACCGTCG AGGAGTACAT GGCCTACGCG AAGGATATCG ACAGCATGGC TGGCGACATC
TACCGCTACC TGAGCTTCGA CCAGATCGCC GACTTCCGTG AAGCCGCGGC CAACGCCAAG
ATCCCGGTCG TTCAGGCCTG A
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| Protein sequence | MLEAYRKHVA ERAAQGIVPQ PLNAEQTAGL VELLKNPPAG EEEFLVDLIT NRVPPGVDEA
AYVKAGFLSA IAKGEATSPL ISKQRAVELL GTMQGGYNIA TLVELLDDAT LGAVAAEQLK
HTLLMFDAFH DVAEKAKAGN ANAKAVLQSW ADGEWFTNKP AIAEKYSLAV FKVPGETNTD
DLSPAPDAWS RPDIPLHALA MLKMARDGIV PEQQGAIGPL KQIEEIKAKG FPVAYVGDVV
GTGSSRKSAT NSVLWFFGDD IPYVPNKRAG GFCFGTKIAP IFYNTMEDAG ALPIEFDVSN
INMGDVIDVY PYAGKVCKHG TDEVITTFEL KTPVLLDEVR AGGRIPLIVG RGLTEKARAE
LGLGSSDLFK KPEQPADSGK GFTLAQKMVG KACGVEGVRP GTYCEPKMTT VGSQDTTGPM
TRDELKDLAC LGFSADLVMQ SFCHTAAYPK PIDVTTHHTL PDFIRTRGGV SLRPGDGIIH
SWLNRMLLPD TVGTGGDSHT RFPIGISFPA GSGLVAFAAA TGVMPLDMPE SVLVRFKGKM
QPGITLRDLV HAIPYYAIQK GLLTVEKKGK KNIFSGRILE IEGLDNLTVE QAFELSDASA
ERSAAGCTIK LPETAIAEYL QSNITLLRWM ISEGYGDART LERRAQAMEA WLANPVLMEA
DKDAEYAEVI EIDLAELKEP VLCAPNDPDD ARLLSTVAGD KIDEVFIGSC MTNIGHFRAA
GKLLDKVKGG IPTRLWLSPP TKMDAHQLTE EGYYGIYGKA GARMEMPGCS LCMGNQARVA
ANSTVVSTST RNFPNRLGDG ANVYLASAEL AAVASILGKL PTVEEYMAYA KDIDSMAGDI
YRYLSFDQIA DFREAAANAK IPVVQA
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