| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_2541 |
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| Symbol | |
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| ID | 5108008 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 2805332 |
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| End bp | 2806495 |
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| Gene Length | 1164 bp |
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| Protein Length | 387 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640503785 |
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| Product | fatty acid desaturase |
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| Protein accession | YP_001188029 |
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| Protein GI | 146307564 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.00838464 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.00025026 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAATATCC TGCATTACCT GAAGTACTTC CTGTTCCATG CCATCGGCCT GTTCGCCGTG
CTGGCGCTGC TCGCCGGCGG CGCCTACACC ACCGGCGGCC TGCTGACGGT GCTGGCGATC
TACCTGCTGG GCGATGCCGT CTGCGGCGAC GACACCTCGA CCCCGCGCTT CAAGCATCCG
TGGATTCTCA CCGTGCAACT GTGGCTGGCC CTGCCGCTGC TGGCGTTGAT CGTGTTCACC
GCGGTATGGA CGGTGAGCGG CGGCGACCCC TTGGGCTTCG GCGCCTGGGC CAGCGCGCTG
AGCGGCTACG ACGTGCTCGC CGCGCGCGAG GCGACCGCCT TCGGCCACCA CGTCGCGGCG
GTGATCCTCA CCGGCCTGAT GATCGGCATG ATCGGCACCA TCACCGCCCA CGAGCTGACC
CACCGCACCT GGGACCCGGT GTCCATGCTG ATCGGCCGCT GGCTGCTGGC CTTCAGCTTC
GACACCAGCT TCGCCATCGA GCACGTCTAC GGCCACCACC GCTACGTTTC CACCCGCGAG
GACCCGGCCA CCGCGCCGCG CGGGCGCAAC GTCTACTTCC ATATCCTCGC CTCCACCCTC
AAGGGCAACC TCAGCGCCTG GCAGATCGAG AAGAAGCGCC TGCAGCGCAA GGGCCATGCC
CTGTTCGGCT GGCGCAACGC GCTGCTGCGC GGCCACCTGA TGAGCGCGCT GCTGGTGCTG
GCCGCCTGGG CCATGGGCGG GGTGGTGGCG GCGCTGTTCT TCGTCGCCTG CGCGCTGTGG
GGCAAGGCCT TGCTGGAGAT CGTCAACTAC ATGGAGCACT ACGGCATGGT GCGCAACCCG
GCCACGCCGG TGCAGCCGCG CCACTCGTGG AACAGCAACC GGCGCATCAG CTCCTGGACC
ATGTTCAACC TGACCCGCCA CTCCCACCAC CACGCCCAGG GCGAAGTGCC CTACCAGGAC
CTGCAACCCT TCGCCGAGGC GCCGATGATG ATCGGCGGCT ACCTGACCAC CATCATCGTG
GCGATGATCC CGCCGCTGTG GCACCGCCTG ATGACGCCCA AGGTGCTGGC CTGGGACCGC
GACTACGCCA CGGCGGAGGA GCGCGAGCTG GCCGCCCAGG CCAACGCGCG CAGCGGCATC
GCCGCGCTGC AGCGGAGTCT GTAG
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| Protein sequence | MNILHYLKYF LFHAIGLFAV LALLAGGAYT TGGLLTVLAI YLLGDAVCGD DTSTPRFKHP
WILTVQLWLA LPLLALIVFT AVWTVSGGDP LGFGAWASAL SGYDVLAARE ATAFGHHVAA
VILTGLMIGM IGTITAHELT HRTWDPVSML IGRWLLAFSF DTSFAIEHVY GHHRYVSTRE
DPATAPRGRN VYFHILASTL KGNLSAWQIE KKRLQRKGHA LFGWRNALLR GHLMSALLVL
AAWAMGGVVA ALFFVACALW GKALLEIVNY MEHYGMVRNP ATPVQPRHSW NSNRRISSWT
MFNLTRHSHH HAQGEVPYQD LQPFAEAPMM IGGYLTTIIV AMIPPLWHRL MTPKVLAWDR
DYATAEEREL AAQANARSGI AALQRSL
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