| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_2517 |
|---|
| Symbol | |
|---|
| ID | 5107984 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas mendocina ymp |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009439 |
|---|
| Strand | - |
|---|
| Start bp | 2780743 |
|---|
| End bp | 2781177 |
|---|
| Gene Length | 435 bp |
|---|
| Protein Length | 144 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 640503761 |
|---|
| Product | putative thiol-disulphide oxidoreductase DCC |
|---|
| Protein accession | YP_001188005 |
|---|
| Protein GI | 146307540 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3011] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 0.340131 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 37 |
|---|
| Fosmid unclonability p-value | 0.324928 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTGAAG CCAGGTTGCC GCCCGGTCTC GCGGCTGGCG AGCGCGTCGT GCTGTTCGAC
GGCGTCTGCA AACTGTGCAA CGGCTGGGCG AAGTTTCTTA TCCGCCATGA CCCTGCGCGG
CAGTTTCGCC TGGCGTCCGT GCAGTCCGCT CAGGGCCAGG CGTTGCTGGC CTGGTACGGG
CTGCCGACCG ATCGTTTCGA CACCATGGCC CTAATCGACG AGGCGGGGCT GCATGTGCGC
TCCACGGCGC TGCTGCGCAT TCTTTCGCGC TTGCCGCAAC CCTGGCGTGC GCTGCGATTG
CTGCGCCTGC TGCCCCGGCC GCTGCGGGAT TGGGGTTATG ACCGCATTGC GCTGAATCGC
TATCGCCTGT TCGGCCGGCA TGCCGTCTGC CTGCTGCCCA CGGCCGACCA CGCCGAGCGC
TTTTTGCATG ACTGA
|
|---|
| Protein sequence | MTEARLPPGL AAGERVVLFD GVCKLCNGWA KFLIRHDPAR QFRLASVQSA QGQALLAWYG
LPTDRFDTMA LIDEAGLHVR STALLRILSR LPQPWRALRL LRLLPRPLRD WGYDRIALNR
YRLFGRHAVC LLPTADHAER FLHD
|
|---|
| |