Gene Pmen_2516 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_2516 
Symbol 
ID5107983 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp2780343 
End bp2780750 
Gene Length408 bp 
Protein Length135 aa 
Translation table11 
GC content65% 
IMG OID640503760 
ProductDoxX family protein 
Protein accessionYP_001188004 
Protein GI146307539 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.327556 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value0.323158 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGAAC GCCGGCTGGC GCAGATCGCC TGGCTTGCGC GGCTGGCATT GGCGGCGGTA 
TTCGTCTGGC ATGGTCTGGC GCCGAAGATT CTCTGGCTGA GCCCTGACGA GGTGGCGATG
ATCGGTGCGC ACGGCTTGCC CGATCACGCA TTGTTCGCGC CCGAGCTGAT CGCCCGTATC
GGCGGTGTTG CCGAGGTATT GCTGGGCATC GCGCTGCTGA CGATTCGCCG TCAGCGCTGG
CCGTTGCTGG TGGCCGCTGC AGTCTTGCTG GTGCTGCTGC TTGATGTTGC GCTACTGAGC
CCCCATCTGT TGATTCAGGC GTTCAATCCG CTGTCCACCA ACCTGGCGGC GCTGGCTCTC
TGCGCGGTGG CCTGGCTGGC CGAAGCGCCT GCCACCGCCA ACTCCTGA
 
Protein sequence
MTERRLAQIA WLARLALAAV FVWHGLAPKI LWLSPDEVAM IGAHGLPDHA LFAPELIARI 
GGVAEVLLGI ALLTIRRQRW PLLVAAAVLL VLLLDVALLS PHLLIQAFNP LSTNLAALAL
CAVAWLAEAP ATANS