Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_2516 |
Symbol | |
ID | 5107983 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | - |
Start bp | 2780343 |
End bp | 2780750 |
Gene Length | 408 bp |
Protein Length | 135 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640503760 |
Product | DoxX family protein |
Protein accession | YP_001188004 |
Protein GI | 146307539 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.327556 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 0.323158 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACTGAAC GCCGGCTGGC GCAGATCGCC TGGCTTGCGC GGCTGGCATT GGCGGCGGTA TTCGTCTGGC ATGGTCTGGC GCCGAAGATT CTCTGGCTGA GCCCTGACGA GGTGGCGATG ATCGGTGCGC ACGGCTTGCC CGATCACGCA TTGTTCGCGC CCGAGCTGAT CGCCCGTATC GGCGGTGTTG CCGAGGTATT GCTGGGCATC GCGCTGCTGA CGATTCGCCG TCAGCGCTGG CCGTTGCTGG TGGCCGCTGC AGTCTTGCTG GTGCTGCTGC TTGATGTTGC GCTACTGAGC CCCCATCTGT TGATTCAGGC GTTCAATCCG CTGTCCACCA ACCTGGCGGC GCTGGCTCTC TGCGCGGTGG CCTGGCTGGC CGAAGCGCCT GCCACCGCCA ACTCCTGA
|
Protein sequence | MTERRLAQIA WLARLALAAV FVWHGLAPKI LWLSPDEVAM IGAHGLPDHA LFAPELIARI GGVAEVLLGI ALLTIRRQRW PLLVAAAVLL VLLLDVALLS PHLLIQAFNP LSTNLAALAL CAVAWLAEAP ATANS
|
| |