| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_2500 |
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| Symbol | sucC |
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| ID | 5107376 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 2762413 |
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| End bp | 2763579 |
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| Gene Length | 1167 bp |
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| Protein Length | 388 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640503744 |
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| Product | succinyl-CoA synthetase subunit beta |
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| Protein accession | YP_001187988 |
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| Protein GI | 146307523 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0045] Succinyl-CoA synthetase, beta subunit |
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| TIGRFAM ID | [TIGR01016] succinyl-CoA synthetase, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.680576 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 0.0920336 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCTTC ACGAGTATCA GGGTAAGCAG CTGTTCGCTG AATACGGCCT GCCCGTATCC
AAGGGCTTCG CGGTAGACAC CCCCGAAGAA GCCGCAGAAG CCTGCGAAAA AATCGGCGGC
AGCGAGTGGG TCGTCAAGGC TCAGGTCCAC GCTGGTGGCC GCGGCAAAGC CGGTGGCGTA
AAGCTGGTCA AGAGCAAAGA AGACGCCAAG GCCTTCGCCG CCAACTGGCT GGGCAAGCGT
CTGGTGACCT ACCAGACTGA CGCCAACGGT CAGCCGGTCA GCAAAATCCT GGTCGAATCC
TGCACCGACA TCGCCAAGGA GCTGTACCTG GGCGCCGTCG TGGACCGCTC CAGCCGTCGC
ATCGTGTTCA TGGCTTCCAC CGAAGGTGGC GTGGACATCG AGAAAGTGGC CCACGAAACC
CCTGAGAAGA TCCTCAAGGC CACCATCGAT CCGCTGGTCG GCGCTCAGCC GTACCAGGGC
CGCGAGCTGG CTTTCCAGCT GGGTCTGGAA GGCGATCAGG TCAAGCAGTT CACCCACATC
TTCGTTGGCC TGGCCAAGCT GTTCCAGGAC TACGACCTGG CTCTGCTGGA AGTGAACCCG
CTGGTGATCA AGGCTGACGG CAACCTGCAC TGCCTGGACG CCAAGATCAA CATCGACTCC
AACGCCATGT ACCGTCAGCC CAAGCTGCGC GCCATGCACG ACCCGTCCCA GGACGATCCG
CGTGAAGCCC ATGCGCAGAA GTGGGAGCTG AACTACGTTG CGCTGGAAGG CAACATCGGT
TGCATGGTCA ACGGTGCCGG CCTGGCCATG GGCACCATGG ACATCGTCAA CCTGCACGGC
GGTCAGCCGG CCAACTTCCT CGACGTAGGT GGTGGCGCGA CCAAAGAGCG CGTGACCGAA
GCGTTCAAGA TCATCCTCTC CGATGACAAC GTCAAAGCCG TTCTGGTGAA CATCTTCGGC
GGTATCGTTC GTTGCGACAT GATTGCCGAA GGCATCATCG GCGCCGTGAA GGAAGTCGGC
GTGAAGATCC CGGTGGTCGT CCGCCTGGAA GGTAACAACG CCGAGCTGGG CGCCAAGGTC
CTGGCTGACA GCGGTCTGAA CATCATCGCG GCAACCAGCC TGACCGACGC TGCCCAGCAG
GTCGTCAAGG CCGCGGAGGG TAAGTAA
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| Protein sequence | MNLHEYQGKQ LFAEYGLPVS KGFAVDTPEE AAEACEKIGG SEWVVKAQVH AGGRGKAGGV
KLVKSKEDAK AFAANWLGKR LVTYQTDANG QPVSKILVES CTDIAKELYL GAVVDRSSRR
IVFMASTEGG VDIEKVAHET PEKILKATID PLVGAQPYQG RELAFQLGLE GDQVKQFTHI
FVGLAKLFQD YDLALLEVNP LVIKADGNLH CLDAKINIDS NAMYRQPKLR AMHDPSQDDP
REAHAQKWEL NYVALEGNIG CMVNGAGLAM GTMDIVNLHG GQPANFLDVG GGATKERVTE
AFKIILSDDN VKAVLVNIFG GIVRCDMIAE GIIGAVKEVG VKIPVVVRLE GNNAELGAKV
LADSGLNIIA ATSLTDAAQQ VVKAAEGK
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