Gene Pmen_2489 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_2489 
Symbol 
ID5107365 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp2751913 
End bp2752692 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content67% 
IMG OID640503733 
Producthypothetical protein 
Protein accessionYP_001187977 
Protein GI146307512 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.721538 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.0767999 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACGCA TCACTTCCCT CTGCACCGCC GGCCTGCTGA CTCTGGGCGC AGGTGCCGCC 
GGCGCCACCG AACTGCTCGC GCTGAGCGCC GATGGCACGC TGTACAAGGT CGATGTCGCC
AGCCTCAAGG TCACCGCCAG CATGGCGGTC AGCGGCGCCA GCGACCTGCG CGGCCTGGAT
GTGCGTCCGG CTAGCGGTCA GTTCTATGCC CTGAGCGGCA CCGATCAGCT CTACACCCTC
GACGCCGCCA GCGGTCAGGC GACCGCAGGC AGCAAACTGC AAACCGCGCT GTCAGGCAGC
GGCCAGGCCG TGGTCGACTT CAACCCAGTG GCCGACCGCC TGCGCCTGCT CGGCCCGGAC
GGCACCAGCC TGCGGGTGAA TGTCGATACC GGTGAAGTGG CCGTAGACGG CAAGCTTGCC
TACGCCGCCG ACGGCCCTTA CGCCGGCCAG CAGCCCAAGG TGGTCGCCGG CGCCTACACC
AATGCCTATG CCGGCACGCA AAGCACCGCG CTGTACAACA TCGACCTGGC CAGCGCCAGC
CTGATGCTGC AGAACCCGCC AAACGACGGC GTGCAGCAAC TGGTCGGCAA GGTCGCCGAT
GACCTAGAGG CGGCCGCCAT GGATATTGCC AGCGATGGCA AGGGTGGCAA CACCGCCTAC
GTGCTGACCG GCAAGACCCT GCATCAGCTC GATCTGGCCA GCGGCAAGCC CACCACCCTG
GGCGAGGTGG CCGAGCTGCC GGACGGCATC ATTGATATCG CCGTACTGCC AGCGCAGTGA
 
Protein sequence
MKRITSLCTA GLLTLGAGAA GATELLALSA DGTLYKVDVA SLKVTASMAV SGASDLRGLD 
VRPASGQFYA LSGTDQLYTL DAASGQATAG SKLQTALSGS GQAVVDFNPV ADRLRLLGPD
GTSLRVNVDT GEVAVDGKLA YAADGPYAGQ QPKVVAGAYT NAYAGTQSTA LYNIDLASAS
LMLQNPPNDG VQQLVGKVAD DLEAAAMDIA SDGKGGNTAY VLTGKTLHQL DLASGKPTTL
GEVAELPDGI IDIAVLPAQ