| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_2475 |
|---|
| Symbol | |
|---|
| ID | 5107351 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas mendocina ymp |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009439 |
|---|
| Strand | - |
|---|
| Start bp | 2739168 |
|---|
| End bp | 2741126 |
|---|
| Gene Length | 1959 bp |
|---|
| Protein Length | 652 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 640503719 |
|---|
| Product | sulfatase |
|---|
| Protein accession | YP_001187963 |
|---|
| Protein GI | 146307498 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1368] Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 40 |
|---|
| Fosmid unclonability p-value | 0.84195 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCAATGC TTCATTACGC GCAACTTCGT TATCTGTCGA TCATTCTGCT GGCCTGGCTG
GCAGTTTTTT TCCTCACCCG CAGCCTATTG CTGCTCGGCC ACCTGGGCGA TGCCGGTTTG
ACGCTGCCGG GGCTGTTTGG CCTGTACGGC GTCGGCCTGG TCTACGACCT CAGCTTCCTG
GTGTACGCCG CGCTGCCGCT GGCGCTGTAC CTGCTGCTGT GTCCGGCCTG GTTATGGCGC
CGCCGCTGGC ATCAGCGCCT GCTGATTGCC CTGGTAGCCG TCAGCCTGTT CGCGATGTTC
TTCACCGCAG TGGCCGAATG GCTGTTCTGG GACGAGTTCG GCGTGCGCTT CAACTTCATC
GCCGTGGACT ACCTCGTCTA TTCCAAGGAG GTGGTGGACA ACATTCTCGA GTCCTATCCG
ATCTATCCCT TGCTGGCCCT GCTGGCGGCC ATGGCCATCT GCCTGACGCT GGCGCTGCGG
CGGCCGCTGC GAGCGGCATT GGAGGCGCCG CGTCTGCCTG CGCTACAGGC TGTCTGCACG
TTGGTCATGC TGGCGCTGCT GGCTGGCCTG TGCAGTGGCC TGGTGGGGCA GGACGCGCCG
CGTGGCCTGG GTGGCAACAC CTATCAAAGG GAACTGGCGA GCAACGGTCC GTACCAGTTC
TTCGCCGCAT TCCGTAACAA CGAACTGGAT TACCAGCAGT TCTACGCCAC CTTGCCTGAT
GCGCTGGTGG CTGCGCAGCT GCGCGCCGAG GTGGCCGAGC CCAATGCCCG TTTCATCGGC
AGCGATCCGC AGGACATCCG CCGGCTGATC GACAACCCCG GCTCGCCGCG CAAGCTCAAT
GTGGTGCTGG TGACCATCGA GAGCCTGAGC GCCAAATACC TGGGCAGCTT CGGCGACACG
CGAGGGTTGA CCCCGAACCT TGACGAGCTG CGCAAGCACG CCCTGGTGTT CACCAACTTC
TACGCCACCG GTACGCGCAC CGACCGCGGC CTGGAAGCGC TGACCCTGTC GGTACCGCCG
ACGCCGGGGC GCTCCATCGT CAAGCGCATC GGCCGTGAGT CCGGTTACGC CAGCCTGGGC
CAGCAACTGA GCGCTCAGGG CTACGACAGC GTCTTCGTCT ACGGCGGCCG CGGCTATTTC
GACAACATGA ACGCCTTCTT CGGCGGCAAT GGTTATCGCG TCGTCGACCA GAGCAGCGTC
GACGAGGCCG AGATGAGCTT CCAGAACGCC TGGGGCATGG CCGACGAGGA CCTCTATCGC
CAGGCGATCA AGGTGGCCGA TGCCGATCAC GCCGCCGGCA AGCCGTTCCT CCTGCAACTG
ATGACTACCT CCAACCACCG TCCCTACACC TACCCGGACG GGCGCATCGA CATTGCCTCC
GGCGACGGGC GCGAAGGGGC GGTGAAGTAC ACCGATTACG CCATCGGCCA GTTCCTCGCC
GAGGCGCGCA GCAAGCCCTG GTTCGATCAG ACGCTATTCG TCTTCGTCGC CGACCATACC
GCCGGCAGTG CCGGGCGTGA GGACCTGCCG GTGGCCAACT ACCACATCCC CTTATTCATC
TATGCCCCCA GCTACATCGA GCCGGGCGAG TACCGCGACG TGGCCAGCCA GATCGACGTG
GCGCCGACGC TGCTCGGCCT GCTCAACCTG GATTACGTCT CCACCTTCTT CGGCCGCAAC
CTGCTGCGCG CGGATCATCC AGCAGGCCGT GCGCTGCTGG GCAACTACCA GCACCTGGGG
CTGTTCGACG GCAAGGATTT GGCGATTCTC AGCCCGCGCC GGGGCATGCG CCGCCATGAC
GATGCCCTGG GGCTGAGCCA TGAGTCGCGC AGCGATGGCG ACGATCCGCT GCTGCGTCGC
GACATCGCTT ACTACCAGGG CGCCAGCCAT GCCTTCAGTA AACATCTGAT GGCCTGGCAT
CCAGATAGCC AATCCAGCCA GCAACTCAGT GAGCGCTAA
|
|---|
| Protein sequence | MPMLHYAQLR YLSIILLAWL AVFFLTRSLL LLGHLGDAGL TLPGLFGLYG VGLVYDLSFL
VYAALPLALY LLLCPAWLWR RRWHQRLLIA LVAVSLFAMF FTAVAEWLFW DEFGVRFNFI
AVDYLVYSKE VVDNILESYP IYPLLALLAA MAICLTLALR RPLRAALEAP RLPALQAVCT
LVMLALLAGL CSGLVGQDAP RGLGGNTYQR ELASNGPYQF FAAFRNNELD YQQFYATLPD
ALVAAQLRAE VAEPNARFIG SDPQDIRRLI DNPGSPRKLN VVLVTIESLS AKYLGSFGDT
RGLTPNLDEL RKHALVFTNF YATGTRTDRG LEALTLSVPP TPGRSIVKRI GRESGYASLG
QQLSAQGYDS VFVYGGRGYF DNMNAFFGGN GYRVVDQSSV DEAEMSFQNA WGMADEDLYR
QAIKVADADH AAGKPFLLQL MTTSNHRPYT YPDGRIDIAS GDGREGAVKY TDYAIGQFLA
EARSKPWFDQ TLFVFVADHT AGSAGREDLP VANYHIPLFI YAPSYIEPGE YRDVASQIDV
APTLLGLLNL DYVSTFFGRN LLRADHPAGR ALLGNYQHLG LFDGKDLAIL SPRRGMRRHD
DALGLSHESR SDGDDPLLRR DIAYYQGASH AFSKHLMAWH PDSQSSQQLS ER
|
|---|
| |