| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_2474 |
|---|
| Symbol | |
|---|
| ID | 5107350 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas mendocina ymp |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009439 |
|---|
| Strand | - |
|---|
| Start bp | 2738433 |
|---|
| End bp | 2739158 |
|---|
| Gene Length | 726 bp |
|---|
| Protein Length | 241 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 640503718 |
|---|
| Product | phosphoesterase, PA-phosphatase related |
|---|
| Protein accession | YP_001187962 |
|---|
| Protein GI | 146307497 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3907] PAP2 (acid phosphatase) superfamily protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 0.706533 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 45 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCATCCC GTTATTTCGA CTTTCGTCTG GCGCTCGGCA TACCGGTACT GCTCATGGCG
CTGCTGCTGG CGTTCGACCC CAGCCCGGTG GATTTCGCCC TGGCGCGGCT GTTCTACGAA
CCCGGACAAG GTTTCATCGG GCGTAGCAGC TTCTGGCTCG AGGACATCCT GCATGACCGC
GCCAAGCAGG CGCTGATCCT GCTCGGTGTG CTGGCTATCG CAGGCTTCGC GCTCAGCCTG
CTGCCCACGC GACTACGCCA ATGGCGCCGA CAGCTTGGCT ATCTGGTGCT GGCGCTGGGG
CTGTCGACTT CGCTGGTCAC CCCGTTGAAA ACGCTCACCG GCATGCACTG CCCCTGGAGC
CTGAGCGAGT TCGGCGGCCA GGAGCAATTC ACGCCGCTGC TGGCCGAGCG CGCACCGACC
GCCAATCCCG GCCGCTGCTG GCCGGGCGGC CATGCCTCGG CGGGGTTCTC GCTGCTGGCA
CTGTTCTTCG TCCTGCGTGA CCGGAGACCG CGGATGGCAC GTATTGCGCT GGTGGTGGCA
CTTGGGCTCG GCTCGCTGTT TTCCCTGGGG CGCATGCTGC AAGGGGCGCA CTTTCTCTCG
CACAACCTGT GGACGCTGCT GATCGATTGG ACAATCTGCG TGCTGACCTA CCGCTGGCTG
CTCTATCGCC AACCTGTCGA ACAGCCATCG CGCAACTCGC TTGAATGGGG AGAAACCTGC
CGATGA
|
|---|
| Protein sequence | MSSRYFDFRL ALGIPVLLMA LLLAFDPSPV DFALARLFYE PGQGFIGRSS FWLEDILHDR
AKQALILLGV LAIAGFALSL LPTRLRQWRR QLGYLVLALG LSTSLVTPLK TLTGMHCPWS
LSEFGGQEQF TPLLAERAPT ANPGRCWPGG HASAGFSLLA LFFVLRDRRP RMARIALVVA
LGLGSLFSLG RMLQGAHFLS HNLWTLLIDW TICVLTYRWL LYRQPVEQPS RNSLEWGETC
R
|
|---|
| |