| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_2412 |
|---|
| Symbol | |
|---|
| ID | 5108252 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas mendocina ymp |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009439 |
|---|
| Strand | + |
|---|
| Start bp | 2662393 |
|---|
| End bp | 2662806 |
|---|
| Gene Length | 414 bp |
|---|
| Protein Length | 137 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 640503656 |
|---|
| Product | NADH dehydrogenase subunit A |
|---|
| Protein accession | YP_001187900 |
|---|
| Protein GI | 146307435 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0838] NADH:ubiquinone oxidoreductase subunit 3 (chain A) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.0647802 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 0.0535998 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCTGATG TGCCATCGAC CCTGTCCCAC GACTGGGCCT TTGCTGTGTT CCTGCTCGGA
GTGTGCGGGC TCATCGCCTT CATGCTCGGC GTTTCCAGCC TGCTCGGCAG CAAGGCCTGG
GGACGCAGCA AGAACGAACC CTTCGAGTCG GGCATGCTCC CCACCGGCAA CGCGCGGCTG
CGCCTGTCCG CCAAGTTCTA TCTGGTCGCG ATGCTCTTCG TGATCTTCGA CGTTGAAGCC
CTCTTTCTCT TCGCCTGGGC GGTCTCGGTA CGCGAAAGCG GCTGGGTCGG CCTGGTCGGT
GCTACCGTTT TCATAACCAT TCTGTTCGCG GGTCTTGTCT ACGAGTCGGC GATAGGTGCG
CTGGATTGGG CACCTGAGGG ACGCCGCAAG CGGCAGGCGA AGCTGAAACA ATGA
|
|---|
| Protein sequence | MPDVPSTLSH DWAFAVFLLG VCGLIAFMLG VSSLLGSKAW GRSKNEPFES GMLPTGNARL
RLSAKFYLVA MLFVIFDVEA LFLFAWAVSV RESGWVGLVG ATVFITILFA GLVYESAIGA
LDWAPEGRRK RQAKLKQ
|
|---|
| |