| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_2365 |
|---|
| Symbol | |
|---|
| ID | 5108207 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas mendocina ymp |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009439 |
|---|
| Strand | + |
|---|
| Start bp | 2611087 |
|---|
| End bp | 2612184 |
|---|
| Gene Length | 1098 bp |
|---|
| Protein Length | 365 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 640503607 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_001187855 |
|---|
| Protein GI | 146307390 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1135] ABC-type metal ion transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.0817479 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 0.00312127 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGGCT TCGATCCTCA TCTGCAGCAG GCTGCACAGG CCAGCCAGCA CCTCGACGCG
CACCTGCGCT TCGACACCCT GGGCAAGACC TACGAGGGCG CCCACGGTCC GGTGCAGGCG
CTGCGCGACA TCGACCTGGC GATCGCCCGT GGCGAAGTGT TCGGCATCAT CGGCCGCAGC
GGAGCGGGCA AGTCCTCGCT GCTGCGCACC ATCAACCGCC TGGAGCAACC CTCTAGCGGT
CGGGTGCTGA TCGACGGAAT CGACATCGCC CTGTACGACG AGGAGCAGCT GGTAGCCCTG
CGCCGGCGCA TCGGCATGAT CTTCCAGCAC TTCAACCTGA TGTCGGCCAA GACCGTATGG
CAGAACGTCG AGTTGCCGCT GAAAGTGGCC GGCGTGCCGC GCGAGGCACG CCAGCGCAAG
GTGCGCGAAC TGCTCGAACT GGTGGGTCTG GAAAACAAGC ACGCGGCCTA CCCGGCGCAG
CTTTCCGGCG GGCAGAAACA GCGCGTGGGC ATCGCCCGCG CCCTGGTGCA CGATCCGCAG
ATATTGCTGT GCGACGAAGC CACCAGCGCG CTGGATCCGG AGACCACCCA GTCGATCCTA
GGCCTGCTGC GCGAGATCAA CCGGCGCCTG AACCTCACTG TGGTGCTGAT CACCCACGAG
ATGGCGGTGA TCCGCGAGAT CTGCGACCGC GTGGTGGTGC TGGAGCATGG CGAAGTGGTC
GAGCAGGGGC CGGTGTGGCG GGTGTTCGGC GCGCCGCGCC ACGAGGTGAC GCGCACTCTG
CTCGCGCCGT TGCAGCATGC CCTGCCGGCG CGCCTGCAAG AGCGTCTGCA TAGCGAGCGC
GAAAGCCCTG AGGACGATCT GATACTGCGC CTGCACTACA CCGGCAGCGG CCTGGAGCCT
GACCTGCCGG CCATCGGTGC GGCACCGGGC GGCCGCGTGA CGCTGCTCGA CGCCAGCCTG
GAACAGATCC AGGGCCACGC AGTGGGTCAT CTGATCCTCG CCGTCGGCCA GTCGCCGTTC
GACCACCCCA CCCTGCTCGA CAACCTACGG CCGCTGGCCG ATCACCTGGA GGTACTGGGT
TATGTCACTG CTGCTTGA
|
|---|
| Protein sequence | MSGFDPHLQQ AAQASQHLDA HLRFDTLGKT YEGAHGPVQA LRDIDLAIAR GEVFGIIGRS
GAGKSSLLRT INRLEQPSSG RVLIDGIDIA LYDEEQLVAL RRRIGMIFQH FNLMSAKTVW
QNVELPLKVA GVPREARQRK VRELLELVGL ENKHAAYPAQ LSGGQKQRVG IARALVHDPQ
ILLCDEATSA LDPETTQSIL GLLREINRRL NLTVVLITHE MAVIREICDR VVVLEHGEVV
EQGPVWRVFG APRHEVTRTL LAPLQHALPA RLQERLHSER ESPEDDLILR LHYTGSGLEP
DLPAIGAAPG GRVTLLDASL EQIQGHAVGH LILAVGQSPF DHPTLLDNLR PLADHLEVLG
YVTAA
|
|---|
| |