Gene Pmen_2289 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_2289 
Symbol 
ID5108524 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp2524347 
End bp2524778 
Gene Length432 bp 
Protein Length143 aa 
Translation table11 
GC content65% 
IMG OID640503531 
Producthypothetical protein 
Protein accessionYP_001187779 
Protein GI146307314 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.624192 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.000137704 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCGAGCCG CCGTTTCGAT TCTCCTGCTG GGCTGCCTGA GCGCCGGCCA GGTGTGGGCC 
GAGGCCTGCT ACGTCACTTC GAGTGCCTCC AGCGACGCCA TCGCCGAGGT GGAACAGGAA
CTGTGCTACG AATTCACCGG GATGGACGAA GGTGCCATCG ACTGGTCGTG CAGCAACGAA
AGCACCGACA TGATCCGCCG CGAGCAACAG AAGGTTGCCA GTTGCGCGGC AGATAAGATC
GGCAGCTGCG AAGCCGCGCT GACCCAGGCG ACGCTGGCCA ACTACCGCGC CGGCGACGAC
GACCAGGGCA AACCGCGCCC GGCCGTACCC AACGACGCCA AGGTGATCAC CCACTACTAC
CGCGCCGGCG ATCTCAGGCA GGTACGCATC GACTGCGAAA GCAGCGGCGG TACCTGGCGG
GATCCGCAAT GA
 
Protein sequence
MRAAVSILLL GCLSAGQVWA EACYVTSSAS SDAIAEVEQE LCYEFTGMDE GAIDWSCSNE 
STDMIRREQQ KVASCAADKI GSCEAALTQA TLANYRAGDD DQGKPRPAVP NDAKVITHYY
RAGDLRQVRI DCESSGGTWR DPQ