| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_2276 |
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| Symbol | |
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| ID | 5108511 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 2505537 |
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| End bp | 2506019 |
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| Gene Length | 483 bp |
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| Protein Length | 160 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640503518 |
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| Product | CinA domain-containing protein |
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| Protein accession | YP_001187766 |
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| Protein GI | 146307301 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1546] Uncharacterized protein (competence- and mitomycin-induced) |
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| TIGRFAM ID | [TIGR00199] competence/damage-inducible protein CinA C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.0906635 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.00967543 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGACAGCG TCGAGCAGAT CGTCAACTTT CTGAACAAGT ACAAACTGCG CCTGAGTACG
GCGGAATCCT GCACGGCAGG GCTGATCGCC TCGCTGGTGG CCGATATTCC CGGCAGCGGC
CAGGTGCTCG ACTGCGGTTT CATCGTCTAT TCACCCGAGG CCAAGCAGCA GTGCCTGGGC
GTCAGCGCCG AGACCATCGA GCGCTTCGGC CTCACCAGTG AGGAGGTCGC GCAGGAAATG
GCCCTTGGCG CGCTGACCCG CAGCGGCGCG GATATCGCCC TGGCCAACAC CGGGCTGGCC
GAGGCCGACG ACGAGATGGA CGGCGTGCAG TGCATCGCCT GCGCGATCCG CCTCGATCAG
CACCAGGGCA TCGTCAGCGA GACGGTGCAG TTCAGCGGCG ATCGCAACGA GGTGCGCCGC
GCCGCCGCCA GCTACGCGCT GCTGCAGCTG CCCTATTACT ACGAGCGCCT GCGCGCGGTC
TGA
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| Protein sequence | MDSVEQIVNF LNKYKLRLST AESCTAGLIA SLVADIPGSG QVLDCGFIVY SPEAKQQCLG
VSAETIERFG LTSEEVAQEM ALGALTRSGA DIALANTGLA EADDEMDGVQ CIACAIRLDQ
HQGIVSETVQ FSGDRNEVRR AAASYALLQL PYYYERLRAV
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