Gene Pmen_2264 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_2264 
Symbol 
ID5109207 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp2493627 
End bp2494040 
Gene Length414 bp 
Protein Length137 aa 
Translation table11 
GC content65% 
IMG OID640503506 
Producthypothetical protein 
Protein accessionYP_001187754 
Protein GI146307289 
COG category[S] Function unknown 
COG ID[COG1981] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.124319 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.0478819 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCACTGC TCAAACTGCT GCATTTGACA GCGCTGATCT GCTGGTGCGG CGCGCTGATG 
TACCTGCCGG CAATGATCGC CGCCGGGACC CGCAGCAGCG ACGACCTGTT CTATCGCGAC
CATGCCCATC TGACGCGCAT GGTCTTCACC CTCGTCGCCA CGCCCGCCGC GCTGCTGGCC
ATCGGCTCGG GTACCGCACT GTTCCTGCGC GATGCCCTGT TCGATCCCTG GCTGATCGTC
AAGCTCACCA CCGTTGCCGG CATGGTCATC TGCCATGCGC TGTGTGGCGT GCTGGTCCTG
CGTATCGAAC GCGTCCCCGA GCCATCGCTG CGCCGTGACT GCCTGCTGAT CGGCCTGCTG
ATCGCCAGCC TGATCAGCGC CACGCTCTGG CTGGTGCTGG CCAAGCCCTT CTGA
 
Protein sequence
MPLLKLLHLT ALICWCGALM YLPAMIAAGT RSSDDLFYRD HAHLTRMVFT LVATPAALLA 
IGSGTALFLR DALFDPWLIV KLTTVAGMVI CHALCGVLVL RIERVPEPSL RRDCLLIGLL
IASLISATLW LVLAKPF