Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_2244 |
Symbol | |
ID | 5109188 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | + |
Start bp | 2473522 |
End bp | 2473962 |
Gene Length | 441 bp |
Protein Length | 146 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640503487 |
Product | membrane protein-like protein |
Protein accession | YP_001187735 |
Protein GI | 146307270 |
COG category | [S] Function unknown |
COG ID | [COG1238] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.0054372 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 48 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTGGGAGC TATCAGGCTA CCTGGGCCTA TTCCTCGCGG CCTTCAGTGC CGCGACTTTG ATCCCTGCAC AGTCCGAGGC AGTGCTCACC GGCCTGCTGA TAAGCGGCAA TTACTCGGTG GTCATACTGT TGGTTGTGGC TACTACAGGC AACGTTCTGG GTTCAGCGGT CAACTGGCTG CTCGGTTTCT ATATCGAGCG CTATCGGCAC AAACGCTGGT TTCCGGTAAG TGACGACAAG CTGTCCCGCG CGCAGCGGGC CTACCACCGC TACGGCCGTT GGTCACTGCT GCTGAGCTGG GTACCGATCA TTGGCGACCC GCTGACCCTG ATTGCCGGTG TCATGCGCGA ACCCTTCTGG AGCTTCTTTT TGATCGTGCT GCTGGCCAAG GCGGCTCGAT ACCTGGTGCT CACCGTGGTG ACCCTCGGGA TCATGGGGTA A
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Protein sequence | MWELSGYLGL FLAAFSAATL IPAQSEAVLT GLLISGNYSV VILLVVATTG NVLGSAVNWL LGFYIERYRH KRWFPVSDDK LSRAQRAYHR YGRWSLLLSW VPIIGDPLTL IAGVMREPFW SFFLIVLLAK AARYLVLTVV TLGIMG
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