Gene Pmen_2244 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_2244 
Symbol 
ID5109188 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp2473522 
End bp2473962 
Gene Length441 bp 
Protein Length146 aa 
Translation table11 
GC content59% 
IMG OID640503487 
Productmembrane protein-like protein 
Protein accessionYP_001187735 
Protein GI146307270 
COG category[S] Function unknown 
COG ID[COG1238] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.0054372 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones48 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGGGAGC TATCAGGCTA CCTGGGCCTA TTCCTCGCGG CCTTCAGTGC CGCGACTTTG 
ATCCCTGCAC AGTCCGAGGC AGTGCTCACC GGCCTGCTGA TAAGCGGCAA TTACTCGGTG
GTCATACTGT TGGTTGTGGC TACTACAGGC AACGTTCTGG GTTCAGCGGT CAACTGGCTG
CTCGGTTTCT ATATCGAGCG CTATCGGCAC AAACGCTGGT TTCCGGTAAG TGACGACAAG
CTGTCCCGCG CGCAGCGGGC CTACCACCGC TACGGCCGTT GGTCACTGCT GCTGAGCTGG
GTACCGATCA TTGGCGACCC GCTGACCCTG ATTGCCGGTG TCATGCGCGA ACCCTTCTGG
AGCTTCTTTT TGATCGTGCT GCTGGCCAAG GCGGCTCGAT ACCTGGTGCT CACCGTGGTG
ACCCTCGGGA TCATGGGGTA A
 
Protein sequence
MWELSGYLGL FLAAFSAATL IPAQSEAVLT GLLISGNYSV VILLVVATTG NVLGSAVNWL 
LGFYIERYRH KRWFPVSDDK LSRAQRAYHR YGRWSLLLSW VPIIGDPLTL IAGVMREPFW
SFFLIVLLAK AARYLVLTVV TLGIMG