Gene Pmen_2236 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_2236 
Symbol 
ID5109180 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp2467788 
End bp2468408 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content57% 
IMG OID640503479 
Producthypothetical protein 
Protein accessionYP_001187727 
Protein GI146307262 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.00052496 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones48 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGACTC TTCCCGAGAA AATCCTGGAC ATCATTCAAC AGCTTCCAGA GGGTGAAATT 
CTGACACCAG GCAGATTCCT GCATCAGGGG AATCGACATG CTGTGCAGCG AGGGTTCTCT
CGACTGGTCG AGGGTGGAAT GCTGTTTCGC GTTGCTCGGG GCTTTTATGT TGCAGCAGTC
GAAACTCGGT TCGGCGTGCG CGCACCGGCA CCTGAGACGG TCGTCCGCTC ATTGGCAAAC
GTGCGGGGTG AGTTGATAGT CGCCACTGGG GCTAGCGCCG CAAACAAATG GGGGCTGACA
ACGCAGGTTC CTATTCGGTA TGTCTTTCTA ACCACCGGAC GTTCTAGGGA GCTTCAGGTT
GGCAAGTCCA CCGTATCGAT TCGGCATGCG CCTCAATGGT TAATGGCTCT TGGCGCTACT
GGAGCGGGGG ACGCCATCCG AGCATTGGTT TGGCTTGGCG AGGCAAGCGC GGGGGATGCA
GTTTCCAAAC TTCATGAGCT GCTACCCGAG AGCGAATGGG GTGCTCTTGT GTCAGCTCAC
CGCTCGTTAC CTATCTGGAT GGCGAATGCA ATCTGCGCTC AGTCGAGTTG CACCTGCACC
CACCCTGTCA AGTTGGGCTA G
 
Protein sequence
MKTLPEKILD IIQQLPEGEI LTPGRFLHQG NRHAVQRGFS RLVEGGMLFR VARGFYVAAV 
ETRFGVRAPA PETVVRSLAN VRGELIVATG ASAANKWGLT TQVPIRYVFL TTGRSRELQV
GKSTVSIRHA PQWLMALGAT GAGDAIRALV WLGEASAGDA VSKLHELLPE SEWGALVSAH
RSLPIWMANA ICAQSSCTCT HPVKLG