| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_2201 |
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| Symbol | |
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| ID | 5109146 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 2434607 |
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| End bp | 2435509 |
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| Gene Length | 903 bp |
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| Protein Length | 300 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640503445 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001187693 |
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| Protein GI | 146307228 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.00946947 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAATCGCA ACGATTTACG CCGTGTCGAT CTGAACCTGC TGGTGATCTT CGAAACGCTG
ATGTTCGAGA AGAATCTCAC CCGCGCAGCA GAAAAGCTGT TCCTGGGCCA ACCCGCGGTC
AGCGCCGCTC TGGCGCGATT ACGTGATCTC TTCGACGACC CGCTGCTAGT ACGCAACGGG
CGTGGTTTCG AGCCAACGGC ACGCGCACTG GCAATTCTCA AAGAGCTGCA GCCGGCAATG
GATACCATCT CTTGCGCTGT CAGCAGGGCC CGCGAATTCA ATCCGGCCAC TAACCGGGAC
ACGTTCCGCA TCGGCCTGTC CGACGATGCA GAGTTCGGAC TGTTCCCTGC GCTGCTTAAT
CAATTGCGGG AAGAAGCGCC AGAAGTCGTG ATCGTCGTTC GGCGCGTCAA CTTCCTTCTC
ATGTCGCCCA TGCTGGCCTC GGGAGAAATT TCTGTTGGAG TCAGTTACAC CGCTGAACTG
CCCGCCAACG CGAAACGCCG GAAACTGCGT GAGTTGAAGG TCAAGGTGCT AAGAGGCGAT
AGTCGTCCTG GGCCGCTGAC GCTGGACGAT TACTGCGCAC GGCCGCATGC ACTGGTGTCC
TTTTCGGGCG ATCTGACTGG CAATATCGAT AACGACCTGG CCAAGTTGGG GCGCTCGCGC
CGGGTCGTAC TGGCGGTACC GCAATTCAGC GGGCTGCGCT CTATTCTGGC CGGGACGGAA
TTGCTGGCAT CGGTGCCCGA TTACGCCGCT GCGGCCTTGA TCGAAGGAAC CCACCTACGT
GCCGACGACC CTCCGTTTCC GATAGTGACG TCGGATCTGT CCATGGTTTG GAGTGGGGTA
ACCGACAATG ACCCCGCCGA GCGTTGGCTC AGGAGCAAGA TAGTTGAGCA CATGAGCGGT
TAG
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| Protein sequence | MNRNDLRRVD LNLLVIFETL MFEKNLTRAA EKLFLGQPAV SAALARLRDL FDDPLLVRNG
RGFEPTARAL AILKELQPAM DTISCAVSRA REFNPATNRD TFRIGLSDDA EFGLFPALLN
QLREEAPEVV IVVRRVNFLL MSPMLASGEI SVGVSYTAEL PANAKRRKLR ELKVKVLRGD
SRPGPLTLDD YCARPHALVS FSGDLTGNID NDLAKLGRSR RVVLAVPQFS GLRSILAGTE
LLASVPDYAA AALIEGTHLR ADDPPFPIVT SDLSMVWSGV TDNDPAERWL RSKIVEHMSG
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