Gene Pmen_2166 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_2166 
Symbol 
ID5109506 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp2391315 
End bp2392520 
Gene Length1206 bp 
Protein Length401 aa 
Translation table11 
GC content61% 
IMG OID640503410 
Producthypothetical protein 
Protein accessionYP_001187658 
Protein GI146307193 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0753] Catalase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.0255897 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.00875673 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTTGAAAC GTTTCTGGCT CTGGCTCGGT CGGCTGCTCG GCAAGCTGTT GCTCACTCTG 
ATTGTGCTCG GCCTGATCGG CTGGGGCATC GGCGAAGGCT ATTACGCCTG GAAGTTCTCC
GGGCCGGTTT CCACGCAGGA AGAAATCGCA GCCGACGAGG CGGCGCTGAC CCGCCTGATC
ATCGAGGACG CCGTGCGCAT CGTCGAACAG CACCGTGACA ACACCCGTGT GCTGCGTGAC
GCCCACGCCA AGGCGCACGG TTGCGTCAGG GCCGAAGTCC AGGTGCTGGA CGATCTCGAC
GAGAGCCTGC GCCAGGGCGT GTTCGCCGAG CCGGGCCACA CCTGGCAGGC CTGGATGCGC
CTGTCCAACG GCAACGCCTA CCCGCAGTTC GATCGCGCGC GCGATGCCCG AGGCATGGCC
ATCAAGCTTC TCGACGTGCC CGGCGAGAAA CTGATGAAAA ATCCGCTGCA TGCGGGCGAT
CAGGATTTCG TGATGTTCAA CAACACGGCG TTCTTCGTCC GCGACGTGGC CGAGTACCGC
AGCAACTTCG CCGCCCAGGC CGACGGCAAG AAGGTACTGG CCTTCTTTCC CAGCTGGGAC
CCGCGCACCT GGGAAATACG CCATCTCTTC ATCGCCTTGA AGACCCTGGC GCCGGCTCCC
GAGACGCCGG TGGCCACCAC CTACAACTCC ATCGCCCCGT TCAAGCTCGG CTCATTGAAC
ATCAAGTACC GCGTGGTGCC GGCACCGCAG AACTGCCCGC CCTATGAATT GCCCGAGCAG
AACACCGCCC TGCCCAACTT CCTGCGCAAT GCGCTGTACC AGCAGCTGTC CCTGGATCGT
GCTCCGGCCT GCTTCGAACT GCAGGTACAA AAACAGAACG CCCAGTACTA CATGCCCATC
GAAGACACCA GCGTGGAGTG GAGCGAAAAG ATCTCGCCCT TCGAAAGCGT GGCACGTATT
ACCGTCCCGG CTCAGGACTT CGATAGCCGT GAACAAAACC TGTTCTGCGA CAATTTGTCC
TTCAATTCCT GGCATGCACT CGCGGAACAT CGACCGATCG GTGGAATTAA CCGTCTGCGC
AAATCGGTAT ATGAGGCGGT AAGTGCCTAT CGCCACCAAC GCAACGCCCA TGTCGTCGCT
CCAGCCCCCG CTGGCGTTGG GCTGGGGCCG GTGACCAACA ATAGGACAGC GGAACTTTCC
GACTAG
 
Protein sequence
MLKRFWLWLG RLLGKLLLTL IVLGLIGWGI GEGYYAWKFS GPVSTQEEIA ADEAALTRLI 
IEDAVRIVEQ HRDNTRVLRD AHAKAHGCVR AEVQVLDDLD ESLRQGVFAE PGHTWQAWMR
LSNGNAYPQF DRARDARGMA IKLLDVPGEK LMKNPLHAGD QDFVMFNNTA FFVRDVAEYR
SNFAAQADGK KVLAFFPSWD PRTWEIRHLF IALKTLAPAP ETPVATTYNS IAPFKLGSLN
IKYRVVPAPQ NCPPYELPEQ NTALPNFLRN ALYQQLSLDR APACFELQVQ KQNAQYYMPI
EDTSVEWSEK ISPFESVARI TVPAQDFDSR EQNLFCDNLS FNSWHALAEH RPIGGINRLR
KSVYEAVSAY RHQRNAHVVA PAPAGVGLGP VTNNRTAELS D