Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_2166 |
Symbol | |
ID | 5109506 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | - |
Start bp | 2391315 |
End bp | 2392520 |
Gene Length | 1206 bp |
Protein Length | 401 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640503410 |
Product | hypothetical protein |
Protein accession | YP_001187658 |
Protein GI | 146307193 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0753] Catalase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.0255897 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.00875673 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTTGAAAC GTTTCTGGCT CTGGCTCGGT CGGCTGCTCG GCAAGCTGTT GCTCACTCTG ATTGTGCTCG GCCTGATCGG CTGGGGCATC GGCGAAGGCT ATTACGCCTG GAAGTTCTCC GGGCCGGTTT CCACGCAGGA AGAAATCGCA GCCGACGAGG CGGCGCTGAC CCGCCTGATC ATCGAGGACG CCGTGCGCAT CGTCGAACAG CACCGTGACA ACACCCGTGT GCTGCGTGAC GCCCACGCCA AGGCGCACGG TTGCGTCAGG GCCGAAGTCC AGGTGCTGGA CGATCTCGAC GAGAGCCTGC GCCAGGGCGT GTTCGCCGAG CCGGGCCACA CCTGGCAGGC CTGGATGCGC CTGTCCAACG GCAACGCCTA CCCGCAGTTC GATCGCGCGC GCGATGCCCG AGGCATGGCC ATCAAGCTTC TCGACGTGCC CGGCGAGAAA CTGATGAAAA ATCCGCTGCA TGCGGGCGAT CAGGATTTCG TGATGTTCAA CAACACGGCG TTCTTCGTCC GCGACGTGGC CGAGTACCGC AGCAACTTCG CCGCCCAGGC CGACGGCAAG AAGGTACTGG CCTTCTTTCC CAGCTGGGAC CCGCGCACCT GGGAAATACG CCATCTCTTC ATCGCCTTGA AGACCCTGGC GCCGGCTCCC GAGACGCCGG TGGCCACCAC CTACAACTCC ATCGCCCCGT TCAAGCTCGG CTCATTGAAC ATCAAGTACC GCGTGGTGCC GGCACCGCAG AACTGCCCGC CCTATGAATT GCCCGAGCAG AACACCGCCC TGCCCAACTT CCTGCGCAAT GCGCTGTACC AGCAGCTGTC CCTGGATCGT GCTCCGGCCT GCTTCGAACT GCAGGTACAA AAACAGAACG CCCAGTACTA CATGCCCATC GAAGACACCA GCGTGGAGTG GAGCGAAAAG ATCTCGCCCT TCGAAAGCGT GGCACGTATT ACCGTCCCGG CTCAGGACTT CGATAGCCGT GAACAAAACC TGTTCTGCGA CAATTTGTCC TTCAATTCCT GGCATGCACT CGCGGAACAT CGACCGATCG GTGGAATTAA CCGTCTGCGC AAATCGGTAT ATGAGGCGGT AAGTGCCTAT CGCCACCAAC GCAACGCCCA TGTCGTCGCT CCAGCCCCCG CTGGCGTTGG GCTGGGGCCG GTGACCAACA ATAGGACAGC GGAACTTTCC GACTAG
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Protein sequence | MLKRFWLWLG RLLGKLLLTL IVLGLIGWGI GEGYYAWKFS GPVSTQEEIA ADEAALTRLI IEDAVRIVEQ HRDNTRVLRD AHAKAHGCVR AEVQVLDDLD ESLRQGVFAE PGHTWQAWMR LSNGNAYPQF DRARDARGMA IKLLDVPGEK LMKNPLHAGD QDFVMFNNTA FFVRDVAEYR SNFAAQADGK KVLAFFPSWD PRTWEIRHLF IALKTLAPAP ETPVATTYNS IAPFKLGSLN IKYRVVPAPQ NCPPYELPEQ NTALPNFLRN ALYQQLSLDR APACFELQVQ KQNAQYYMPI EDTSVEWSEK ISPFESVARI TVPAQDFDSR EQNLFCDNLS FNSWHALAEH RPIGGINRLR KSVYEAVSAY RHQRNAHVVA PAPAGVGLGP VTNNRTAELS D
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