| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_2149 |
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| Symbol | |
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| ID | 5109489 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 2369792 |
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| End bp | 2370892 |
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| Gene Length | 1101 bp |
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| Protein Length | 366 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640503393 |
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| Product | periplasmic binding protein/LacI transcriptional regulator |
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| Protein accession | YP_001187641 |
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| Protein GI | 146307176 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1879] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.00186046 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 0.396691 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTTTAT ACTGCGCCCG GTTCTCGGGG AGGGGCGTCG TGATCAGGTG GATGCTGGGG
CTGTTGCTCA TGGGGTGCTG CTGCCTTGCT GGCGCGCAGC AGCGGCCGGT TTCCATGGTG
TTTCTCAATC CGGGATACAG CGACGAGCCG TTCTGGGTCG CCTATTCGCG TTACATGCAG
GACGCAGCCG GCGATCTGGG TGTCGAGCTG CGCGTTCTCT ACGGCCAGCG CGACAATGCC
CGTATCCTCG ACAACGCCCA TCAGGTCCTG GCTGGCAAGC GTCCCGATTA CCTGATCTTC
GTCAATGAGC AGTTCACCGG GCCAGAGATC CTGCGCCTGT TCGAGGACAG CGAGGTGCGT
CTGTTCGCCT TGCACAGCAC CCTTACCCCT GAGCAGCAGG CGCTGGCCGG CGGCAGCCGG
GAGCGCTACC GGCACTGGCT GGGTAGCCTG GTACCCAACG ATGAGGAGGC CGGCTACCTG
ATGGCGCGTG CGCTGATCGC CCTGGCAGAC GGCAAGCCTG CGGAAATGCT GGCGTTCACC
GGCATCAAGC AGACGCCCTC GGCGACCTTG CGCGTCGCAG GGCTGGAGCG AGCCCTGGCC
GAGGCTCCGC ATGTTCGCCT GCAGCAGATG CTGTATGGCG AGTGGCGTCA GCAACGTGCC
TATGAGCAGG CGCAGGCGCT GCTGCCGCGC TATCCGAACC TCAATCTGGT GTGGGCGGCC
AACGACGAAA TGGCCTTCGG TGTCATGCTG GCGGCCGAGG AGCAGGGCCG CCGCCTGCAC
TACGCGGCGC TGAACAATTC CCACCGTGTG CTGCAGGCAC GTATCGAGAG GCGTATCGAG
GTGCTGGCCA GCGGCCATTT CATTCTCGGG GGATGCGCCC TGGTCATGCT CTACGATCAT
TCCAGGGGGC TCGATTTCGC CGAGCGTGGT GGCAAGGACC AGGTGGCCAG CCTGCTGCGC
CTGATCGATG ACAAGGATGC CGAGCGCCTG CTCACTCGCC TCGACCAGGA CGACATCGGC
CTGGATTTCC GTACCTTCAG CGCCACCCAT CGACCGCAGA TGAGCCGCTA CGCCTGTTCC
ATCGACAGCC TGCTGCGCTG A
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| Protein sequence | MPLYCARFSG RGVVIRWMLG LLLMGCCCLA GAQQRPVSMV FLNPGYSDEP FWVAYSRYMQ
DAAGDLGVEL RVLYGQRDNA RILDNAHQVL AGKRPDYLIF VNEQFTGPEI LRLFEDSEVR
LFALHSTLTP EQQALAGGSR ERYRHWLGSL VPNDEEAGYL MARALIALAD GKPAEMLAFT
GIKQTPSATL RVAGLERALA EAPHVRLQQM LYGEWRQQRA YEQAQALLPR YPNLNLVWAA
NDEMAFGVML AAEEQGRRLH YAALNNSHRV LQARIERRIE VLASGHFILG GCALVMLYDH
SRGLDFAERG GKDQVASLLR LIDDKDAERL LTRLDQDDIG LDFRTFSATH RPQMSRYACS
IDSLLR
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