Gene Pmen_2138 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_2138 
Symbol 
ID5109478 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp2358607 
End bp2358996 
Gene Length390 bp 
Protein Length129 aa 
Translation table11 
GC content60% 
IMG OID640503382 
Producthypothetical protein 
Protein accessionYP_001187630 
Protein GI146307165 
COG category[S] Function unknown 
COG ID[COG3755] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.268038 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value0.206157 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCATGC CGACTCTGTA CAAGTACCTG AGCCTAGTGT TCCTGCCGCT CACTGCCTGG 
GCCGATTACG ACATGCAGTA CCAGGCCTGC CTGGATGCCA GCGGAGCGAT CAACAACGCC
AGCGTCGCTG GCTGCGCCGA GGGCGTCTCC GAAGCGGCGA AGAAAGAAAT GAACCGGGTC
TACCAGCAGC TTTTTCTCAA GCTGCAGGAA GGTGCGCCGC AAGATGCCCA GCAACTGGAG
GCGACGCAGA AGGCCTGGCT GATCTACCGC AACAGCCAAT GCGACCTGCA GGGCAAGCAC
GTCGGCTCGC CGATGTACTA CACCTGCCCG ATGCAGCTGA ACATTCAGCG CGTCGAGGAG
CTGAAGTTCC TGCTGGAAAA CGGCGATTAG
 
Protein sequence
MTMPTLYKYL SLVFLPLTAW ADYDMQYQAC LDASGAINNA SVAGCAEGVS EAAKKEMNRV 
YQQLFLKLQE GAPQDAQQLE ATQKAWLIYR NSQCDLQGKH VGSPMYYTCP MQLNIQRVEE
LKFLLENGD