| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_2131 |
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| Symbol | |
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| ID | 5109471 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 2352962 |
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| End bp | 2353957 |
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| Gene Length | 996 bp |
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| Protein Length | 331 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640503375 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001187623 |
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| Protein GI | 146307158 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.0617506 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 0.31287 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTGTGC TGACTACGCA CAAGCGGATC ACCATGAACC CCGATGCCCT GACCGACCAG
CTGGAACTCT TTCTCGACGT GCTGGAAACC GGCAGTTTCT CTGCCGCTGC CCGGCGTCAC
CCGCTCACGC CTTCGGCGGT GGCCCGGCGC ATCGACGCCC TGGAGCGCGC CCTGGGCAGC
AGCCTGTTCA GCCGCAGCAC CCATGCGGTA CGCGTGACCC CGGCTGGTCT GGCATTCGCC
GAACGGGCCC GGCGCATTCT TGCCGAGTTG CACCTGGCGC GTGCCGAGGC GGTATCGCTG
AGCAGCGCGC CGGAAGGGTT GATTCGCATC GATGCCCCCT CGCCCTTCGG TCGCCGCCAC
CTGGCGCCAG CGATTGCCGA CTTCCTGCGC GCCAACCCCG GGCTCGACGT GCAGCTGCGC
CTGATCGACA GTTTCACCGA CCTGCAGGGC GAACACCTGG GCGAAGTGGA CATCGTCGTA
CGCATCGGCC CGCTGCCGGA CAGTCGCCTG GTCGCCACCC CATTGGCGTC GATGACCCGC
ATCGTCTGCG CCAGCCCGGA CTACCTGCGC CGCCGCGGCA TCCCGCGCAG CCCGCTGGAG
CTGGAGCAAC ACGACGGCCT GGACTGGGAC AGCCTGGCAC CGCCCTACGC CTGGCGCTTC
GAGGTCGACG GCAAGCTGCA ACTGTGCAAG CCCAAACGCC TGCGCCAGAC CAGCAACAAT
GCCGAGACCC TGCTGTTCAG CGCCCTCGCG GGCCTGGGCG TCGCCCACCT GCCAACCTGG
ATGAGCAGCG AGCATCTGCA GCGTGGCGAG CTGATCCCGC TGTTCTGCGA GCAGGGCCTG
CCGGCCGCTG AGCCGGTGAG CATCTACGCG CTGCGCCTGG AACGCGAAGC CAGCCCGCGC
ACGCGGCTGC TGCTGAGTTT TCTGAAGCAG CGCTTCGGCT TCCCGCCGCC CTGGGACCAG
GCGCTACAGG CCAGCCTGGC GACACCGCAG CAGTAG
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| Protein sequence | MAVLTTHKRI TMNPDALTDQ LELFLDVLET GSFSAAARRH PLTPSAVARR IDALERALGS
SLFSRSTHAV RVTPAGLAFA ERARRILAEL HLARAEAVSL SSAPEGLIRI DAPSPFGRRH
LAPAIADFLR ANPGLDVQLR LIDSFTDLQG EHLGEVDIVV RIGPLPDSRL VATPLASMTR
IVCASPDYLR RRGIPRSPLE LEQHDGLDWD SLAPPYAWRF EVDGKLQLCK PKRLRQTSNN
AETLLFSALA GLGVAHLPTW MSSEHLQRGE LIPLFCEQGL PAAEPVSIYA LRLEREASPR
TRLLLSFLKQ RFGFPPPWDQ ALQASLATPQ Q
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