Gene Pmen_2126 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_2126 
Symbol 
ID5109466 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp2349802 
End bp2350131 
Gene Length330 bp 
Protein Length109 aa 
Translation table11 
GC content55% 
IMG OID640503370 
Productplasmid stabilization system protein 
Protein accessionYP_001187618 
Protein GI146307153 
COG category[R] General function prediction only 
COG ID[COG3668] Plasmid stabilization system protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.127249 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.081563 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCAGA AGCCCATCAT CCCGCGCGAG CTTGCCAACA GAGACGTAGA CAACGCCATT 
TCCTACTACC TCGAAGAACA AGCCGAGAAA GCTGCACTAG GCTTCGTTGA TGTCTTGGAG
CGTGCCTATA AGCAGATCAG CCGCCACCCT GCTTCCGGCT CTGCTCGCTA TGCCCATGAA
CTGGATCTGC CTGGCCTACG TTCGTGGCCA CTTCAGCGCT ATCCTTACCT CGTGTTCTAC
GTCGAGCAAG ACACCCACAT CGATGTTTGG CGCGTGCTGC ACGAGATGAA AGATCTACCC
AAGTGGCTGA GCACCTCAGA AGAGAGCTAG
 
Protein sequence
MKQKPIIPRE LANRDVDNAI SYYLEEQAEK AALGFVDVLE RAYKQISRHP ASGSARYAHE 
LDLPGLRSWP LQRYPYLVFY VEQDTHIDVW RVLHEMKDLP KWLSTSEES