| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_2058 |
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| Symbol | |
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| ID | 5109792 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 2277482 |
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| End bp | 2278501 |
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| Gene Length | 1020 bp |
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| Protein Length | 339 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640503302 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001187551 |
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| Protein GI | 146307086 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4239] ABC-type uncharacterized transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.391891 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 0.494478 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACTCT CCCCTCTCAA TCAACGCCGC TTCGACCGTT TCAAGGCGCA CAAGCGTGGC
TGGTGGTCGC TGTGGCTGTT CCTCATCCTG TTCGCCCTGA GCCTGGGCGC CAAGCTGATC
GCCAACGACA AGCCATTGGC CGTGCGGTAT GACGGCGAAT GGTATTTCCC GGTGCTCAAG
CGCTACCCGG AAACGGTGTT CGGCGGCGAG TTCCCGCTGC AGGCCAACTA CAAGAGTCCC
TATATCCAGG AGCTGATCGC GGAAAAGGAC GGCTGGATGA TCTGGCCGCC GATTCCCTTC
AGCTATTCGA GCATCAACTA CGAACTGGAG GTTCCGGCCC CTGCCCCACC CTCGGCGCAG
AACTGGCTGG GCACCGATGA TCAGGGGCGC GACGTGCTGG CACGGGTGAT CTACGGCTTT
CGCATCTCGG TGCTGTTCGC CCTGATCCTG ACCCTCGCCA GTTCGGTGAT CGGCGTCATC
GCCGGCGCCC TGCAGGGCTT CTACGGCGGC TGGGTCGACC TGCTCGGCCA GCGCTTTCTC
GAGATCTGGT CCGGCCTGCC GGTGCTCTAT CTACTGATCA TCCTGGCCAG CTTCGTGCAG
CCGAACTTCT GGTGGCTGCT GGGCATCATG CTGCTGTTCT CCTGGATGAG CCTGGTGGAC
GTGGTGCGCG CCGAATTCCT CCGCGGCCGC AACCTCGAGT ACGTGCGTGC GGCGCGGGCG
CTGGGCATGG GCAACGGCGC CATCATGTTC CGCCACATCC TGCCCAACGC CATGGTCTCG
ACCATGACCT TCATGCCCTT CATCCTCACC GGCGCCATCG GCACCCTGAC TGCGCTGGAC
TTCCTCGGCT TCGGCCTGCC GCCTGGCGCA CCGTCGCTGG GCGAGCTGGT CGCCCAGGGC
AAGAGCAACC TGCAGGCGCC CTGGCTGGGC ATCAGCGCCT TCGCCGTGCT GGCGATCATG
CTGAGCCTGC TGGTGTTCAT CGGCGAAGCC GCCCGCGATG CCTTCGACCC GAGGAAATGA
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| Protein sequence | MKLSPLNQRR FDRFKAHKRG WWSLWLFLIL FALSLGAKLI ANDKPLAVRY DGEWYFPVLK
RYPETVFGGE FPLQANYKSP YIQELIAEKD GWMIWPPIPF SYSSINYELE VPAPAPPSAQ
NWLGTDDQGR DVLARVIYGF RISVLFALIL TLASSVIGVI AGALQGFYGG WVDLLGQRFL
EIWSGLPVLY LLIILASFVQ PNFWWLLGIM LLFSWMSLVD VVRAEFLRGR NLEYVRAARA
LGMGNGAIMF RHILPNAMVS TMTFMPFILT GAIGTLTALD FLGFGLPPGA PSLGELVAQG
KSNLQAPWLG ISAFAVLAIM LSLLVFIGEA ARDAFDPRK
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