| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_2044 |
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| Symbol | |
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| ID | 5109778 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 2259399 |
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| End bp | 2260262 |
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| Gene Length | 864 bp |
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| Protein Length | 287 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640503285 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001187537 |
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| Protein GI | 146307072 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1175] ABC-type sugar transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.071999 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 0.651728 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGGTGC AGAACAACAA GGCCTGGTGG CTGGTGCTGC CGGTGTTCCT GCTGGTGGCG
TTCAGCGCCA TCGTGCCGAT GATGACGGTG GTCAACTACT CGGTGCAGGA CATCTTCGAC
CCGTCCACGC GCTACTTCGT CGGCGTCGAC TGGTACAAGC AGGTGCTGCA GGACCCGCGT
TTGCACGACT CGCTACTGCG TCAGTTCATC TTCTCCGCCT GCGTGCTGCT GATCGAGATT
CCGTTAGGCA TCGCCATCGC CCTGTGCATG CCGACGCGCG GGCGCTGGGC GTCGCTGTGC
CTGATCCTGA TGGCCATTCC GCTGCTGATC CCGTGGAACG TGGTCGGCAC CATCTGGCAG
ATCTTCGGCC GCGCCGACAT CGGCCTGATG GGCTGGACGC TGAACAAGCT GGGCATCAGC
TACAACTATG CCTCCAACAC CATGGACGCC TGGGTGACGG TGCTCATCAT GGACGTGTGG
CACTGGACGT CGCTGGTGGC GCTGCTGTGC TATTCCGGGC TGCGCGCCAT TCCCGACGTC
TATTACCAGG CGGCGCGCAT CGACCGTGCA TCGAACTGGG CGGTGTTCCG CCATATCCAG
CTGCCCAAGC TGAAAAGCGT GCTGCTGATC GCGGTGATGC TGCGCTTCAT GGACAGCTTC
ATGATCTACA CCGAGCCGTT CGTGCTCACC GGCGGCGGGC CGGGCAACGC CACCACCTTC
CTCAGCCAGA CCCTGACGCA AATGGCCATC GGCCAGTTCG ATCTGGGCCC GGCCGCGGCG
TTCTCGCTGG TGTACTTCCT GATCATCCTG CTGGTGTCCT GGCTGTTCTA CACCGCCATG
ACCCATGACG ACAAAACCCG CTGA
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| Protein sequence | MKVQNNKAWW LVLPVFLLVA FSAIVPMMTV VNYSVQDIFD PSTRYFVGVD WYKQVLQDPR
LHDSLLRQFI FSACVLLIEI PLGIAIALCM PTRGRWASLC LILMAIPLLI PWNVVGTIWQ
IFGRADIGLM GWTLNKLGIS YNYASNTMDA WVTVLIMDVW HWTSLVALLC YSGLRAIPDV
YYQAARIDRA SNWAVFRHIQ LPKLKSVLLI AVMLRFMDSF MIYTEPFVLT GGGPGNATTF
LSQTLTQMAI GQFDLGPAAA FSLVYFLIIL LVSWLFYTAM THDDKTR
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