| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_2035 |
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| Symbol | |
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| ID | 5109769 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 2249134 |
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| End bp | 2249901 |
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| Gene Length | 768 bp |
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| Protein Length | 255 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 640503276 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001187528 |
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| Protein GI | 146307063 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.867093 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 0.485629 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCATATCG ATGATTCCGT ATTTCTGATC ACCGGTGGCG GCTCCGGCCT GGGCCTGGCC
GCTGCCCGTC AGCTGCTGGG CCAGGGCGGC AAGGTGCTGC TGCTGGACAT CAATGCCGAA
GCGGGGCAGC GCGCCGCCGC AGAGCTGGGC GAGGGCGCCC GCTTCGTGCA GGCCGACATC
ACCCGCGAGG AGCACGGCCG TGCGGCTGTG GCGCAGGCAC TGGAGGCCTT TGGCGCCGTG
CACGGGCTGG TCAACTGCGC CGGTATCGCA CCGGCCGAGA AGGTCCTGGG GCGCAGTGGC
GTGCATGGCC TGGACAGCTT CCGCCGTACC GTCGAGGTCA ACCTGATCGG CAGTTTCAAC
CTGCTGCGCC TGGCCGCCGA GGCCATGGCG CAGAACCCGC CGAATGCCGA GGGCGAGCGC
GGGGTGATCG TCAATACCGC TTCGGTGGCG GCCTTCGACG GGCAGATCGG TCAGGCCGCC
TATGCCGCCT CCAAGGGCGG GGTGGCCGCC ATGACCCTGC CGGCGGCGCG CGAGCTGGCG
CGCTCGGGCA TCCGCGTGAT GTGCATCGCC CCGGGCATCT TCGAGACGCC GATGATGGCC
GGCATGCCGC AGGAGGTGCG CGACTCGCTG GCCGCCGGCG TGCCGTTCCC GCCGCGCCTG
GGCCGCCCCG AGGAATACGC CGCGCTGGTG CGCCACATCG TCGAGAACCC CATGCTCAAC
GGCGAGGTGA TCCGCCTCGA TGGCGCGCTG CGTATGGCGG CGAAGTAA
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| Protein sequence | MHIDDSVFLI TGGGSGLGLA AARQLLGQGG KVLLLDINAE AGQRAAAELG EGARFVQADI
TREEHGRAAV AQALEAFGAV HGLVNCAGIA PAEKVLGRSG VHGLDSFRRT VEVNLIGSFN
LLRLAAEAMA QNPPNAEGER GVIVNTASVA AFDGQIGQAA YAASKGGVAA MTLPAARELA
RSGIRVMCIA PGIFETPMMA GMPQEVRDSL AAGVPFPPRL GRPEEYAALV RHIVENPMLN
GEVIRLDGAL RMAAK
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