Gene Pmen_1928 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_1928 
Symbol 
ID5110056 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp2120959 
End bp2121258 
Gene Length300 bp 
Protein Length99 aa 
Translation table11 
GC content61% 
IMG OID640503163 
Producttype IV pilus assembly PilZ 
Protein accessionYP_001187422 
Protein GI146306957 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value0.40036 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTCAGA GTGATCGAGC GTACAGCGAG AAACGCGACT ACATCCGCAT GCGACTGGAA 
GCGCCAGTCA CCCTGCATCA TGCTGGCCGG GAAATTCCGG CCCTGTGCCT GGATCTCTCC
AGCACCGGCA TGCAAATCGA GGCCGAAGTC ATGCTGAAGA TGGGCGACAA GGTCAAGGTG
CACATCCCTT CCGAACACAG CGAACTGGCC GGCCTCGACG CCCAGGCCGA AGTGGTGCGA
ATCGGCGATC TGGGTGACGG ACGCCAATCG CTGGGCCTGG CCATCATCTC GATGAGCTGA
 
Protein sequence
MSQSDRAYSE KRDYIRMRLE APVTLHHAGR EIPALCLDLS STGMQIEAEV MLKMGDKVKV 
HIPSEHSELA GLDAQAEVVR IGDLGDGRQS LGLAIISMS