Gene Pmen_1915 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_1915 
Symbol 
ID5110043 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp2106168 
End bp2106935 
Gene Length768 bp 
Protein Length255 aa 
Translation table11 
GC content60% 
IMG OID640503146 
Producthypothetical protein 
Protein accessionYP_001187409 
Protein GI146306944 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.0846835 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value0.46148 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCCGCAC TCGTGATAAC CCTGCTGATA GTCGGCGGCA TCGCCCTGTT GATGGTGATT 
GCCTATATCA ACCACGCCGT TGAGAACAGC AAGCTGGAAA AGGCCCGTCA GCGTGCCGAC
CTGCTCGACC GCATTCGTCG CTGCCAGGAC ATCTCCGAAC GCATGCCCGG TCAGTTGATG
ACACCACAGC TGAAACTGTT GCTGACCCAG CTGCAGCTGC AGGTCAGCGA GCGTCTGCTA
CCGCTGGACA AGCAGAGCGC GACGCTCAAG GCCGACATCG AAACCCTTCG CGCCCAGGTT
GCTCAGGGCG AATCCATCGC GGTGAAGAAC CCGCCACAGC CCATCGCCAA CGAAGCCAAG
GCCAAGGACG TACGCTTTCT GCTGGAAAAC CTGCACGCCC TGATCACCGG TTCGGTGCAG
AGCGGTCTGT TGCCCGCCAA TGAAGGCAAG CAGTGGATCA AGCAGATTCG CCAGATGCTG
GTGCTGGTAC ACATCGAGTT TTTCAACACG CTGGGCCAGA CAGCCCTGCA GCAGAATCAG
CCCGGCCAGG CCCGTCTGGC CTTCGAGCGC GGCGTGCAAT ATCTGCGCAA GCAACCGGAG
CCGGCGGCAT ACCAGACGCA GCTCAAGCGT TTCGAGGAAC AGCTGGCGCG CGCCAATGCC
ATGGTGCTCA ACAGCAATAT TCCAGCCGCA GACGAGCCCA GCGAGCTGAC CGAGGGTCTG
AAGAACCTGG AAGACGACGA CTGGAAGAAG AAAAACATCT ACGACTGA
 
Protein sequence
MSALVITLLI VGGIALLMVI AYINHAVENS KLEKARQRAD LLDRIRRCQD ISERMPGQLM 
TPQLKLLLTQ LQLQVSERLL PLDKQSATLK ADIETLRAQV AQGESIAVKN PPQPIANEAK
AKDVRFLLEN LHALITGSVQ SGLLPANEGK QWIKQIRQML VLVHIEFFNT LGQTALQQNQ
PGQARLAFER GVQYLRKQPE PAAYQTQLKR FEEQLARANA MVLNSNIPAA DEPSELTEGL
KNLEDDDWKK KNIYD