| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1903 |
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| Symbol | acnA |
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| ID | 5110031 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 2092058 |
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| End bp | 2094799 |
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| Gene Length | 2742 bp |
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| Protein Length | 913 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640503134 |
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| Product | aconitate hydratase |
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| Protein accession | YP_001187397 |
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| Protein GI | 146306932 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1048] Aconitase A |
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| TIGRFAM ID | [TIGR01341] aconitate hydratase 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0189889 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 0.77377 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCTCCC TCGATAGCCT GAACTGCCGC CGCGAACTGA AAGTCGGCGA CGCCACCTAC
CACTACTTCA GCCTGCCCGA AGCCGCCCAG CGCCTCGGCA ACATCGACCG CCTGCCCAAG
TCGCTCAAGG TGCTGCTGGA AAACCTGCTG CGCAACGAAG ACGGCAAGAC CGTACAGCCG
CAGGACCTGC AGGCCATGGT CGACTGGCTC GATAAGCGCG CCTCCGACCG CGAGATCCAG
TACCGCCCGG CGCGCGTGCT GATGCAGGAC TTCACCGGCG TGCCGGCGGT GGTCGACCTG
GCCGCCATGC GCGACGCCAT GGCCAAGGCC GGCGGCGACC CGCAGCGCAT CAACCCGCTG
TCGCCGGTGG ATCTGGTCAT CGACCACTCG GTGATGGTCG ACCGCTACGC CTCCTCCAGC
GCCTTCCACG ACAACGTCGA ACTGGAAATG CAGCGCAACG GCGAGCGCTA CGCCTTCCTG
CGCTGGGGCC AGCACGCCTT CGACAACTTC AGCGTGGTAC CGCCAGGCAC CGGCATCTGC
CACCAGGTCA ACCTCGAGTA CCTGGCGCGC ACCGTGTGGA CCAAGGAAGA AGACGGCGTC
ACCCTCGCCT TCCCCGACAC CCTGGTCGGC ACCGACTCGC ACACCACCAT GATCAACGGT
CTCGGCGTGC TCGGCTGGGG CGTCGGCGGC ATCGAGGCGG AAGCGGCCAT GCTCGGCCAG
CCGGTGTCCA TGCTGATTCC GGAAGTCATC GGCTTCAAGC TCAGCGGCAA GCTCAAGGAA
GGCATCACCG CCACCGACCT GGTGCTCACC GTCACCCAGA TGCTGCGCAA GAAGGGCGTG
GTGGGCAAAT TCGTCGAGTT CTACGGCGAC GGCCTGGCCG ACCTGCCGCT GGCCGACCGC
GCCACCATCG CCAACATGGC CCCGGAATAC GGCGCCACCT GCGGTTTCTT CCCGGTGGAC
GAGATCACCC TCGGCTACCT GCGTCTGTCC GGCCGTCCGG ATGCCACCGT GCAACTGGTC
GAGGCCTACA GCAAGGCCCA GGGGCTATGG CGCGAGGCAG GCGCCGAGCC GCTGTTCACC
GACAGCCTGA GCCTGGACCT GGGCAGCGTC GAAGCCAGCC TGGCCGGACC CAAGCGCCCG
CAGGACCGCG TCTCGCTGGG CCAGGTCAGC CAGGCCTTCG ACGACTTCGT CGGTCTGCAG
CTCAAGCCGA GCGCCAAGGA AGAGGGGCGC CTGCTCAGCG AAGGTGGTGG CGGTACCGCC
GTCGGCGGGG ACAAGCAGAG CGGCGAAATC GACTATGAGG ATGAAGGACA TACCCATCGC
CTGAAAGACG GCGCGGTGGT GATCGCCGCC ATCACCTCCT GCACCAACAC CTCCAACCCC
AGCGTGATGA TGGCCGCCGG TCTGCTGGCC AAGAAGGCGG TGGAAAAAGG CCTGCAGCGC
CAGCCCTGGG TGAAGAGCTC GCTGGCCCCC GGCTCCAAGG TGGTCACCGA GTACTTCAAT
GCCGCCGGCC TGACGCCCTA CCTGGAGAAG CTCGGCTTCG ACCTGGTGGG CTACGGCTGC
ACCACCTGCA TCGGCAACTC CGGCCCGCTG CGCGAGCCCA TCGAGAAGGC CATCACTCAG
GCCGACCTGA CCGTCGCCTC GGTGCTCTCT GGCAACCGCA ACTTCGAGGG CCGCGTGCAC
CCGCTGGTGA AAACCAACTG GCTGGCCTCG CCCCCCCTGG TGGTGGCCTA TGCCCTGGCC
GGCAGCGTGC GCCTCGACCT GACCCGCGAC GCCCTCGGCA CCGGCAAGGA CGGCCAGCCG
GTCTACCTCA AGGACATCTG GCCGACCCAG GCCGAGATCG CCCAGGCCAT CGCCCAGGTC
GACACCGCCA TGTTCCGCAA GGAATACGCT GAGGTCTTCG CCGGCGACGA GAAGTGGCGG
GCCATCGACG TGCCCAAGGC CGACACCTAT GCCTGGCAGG GCGACTCCAC CTATATCCAG
CATCCGCCGT TCTTCGAGGA CATCGCCGGG GATCCGCCAC GCATCACCGA TATCCGCCAG
GCACGCATCC TCGCCCTGCT CGGCGATTCG GTGACCACCG ACCACATCTC GCCGGCCGGC
AACATCAAGG CCGACAGCCC GGCCGGGCGC TACCTGCGCG AGCATGGCGT GAACAGGGCC
GACTTCAACT CCTATGGCTC ACGCCGAGGC AACCACGAAG TGATGATGCG CGGCACCTTC
GCCAACATTC GCATCCGCAA CGAAATGCTC GGCGGTGAGG AAGGCGGCAA TACCCTGCAC
GTGCCCAGCG GCGAGAAGCT GGCGATCTAC GACGCCGCCA TGCGCTATCA GGCCGAAGGC
ACGCCGCTAG TGATCATCGC CGGCAAGGAA TACGGCACCG GCTCCAGTCG CGACTGGGCG
GCCAAGGGCA CCAACCTGCT GGGGGTCAAG GCGGTGATCG CGGAAAGCTT CGAGCGCATC
CACCGCTCCA ACCTGGTAGG CATGGGCGTA CTGCCGCTGC AGTTCAAGCC CGGTACCGAC
CGCAACAGTC TGAGGCTCAG CGGCAGGGAA GTAGTGGCCG TCGAGGGTCT GGAAGGTGTG
GAGTTGCGCC CGCAGATGCC GCTGACGCTG ATCATCACCC GCGAAGACGG CCAGCATGAG
GAGGTCGAAG TGCTGTGCCG CATCGACACC CTCAACGAGG TCGAGTACTT CAAGGCTGGC
GGCATTCTGC ACTACGTGCT GCGCCAGATG ATCGCCAGCT GA
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| Protein sequence | MPSLDSLNCR RELKVGDATY HYFSLPEAAQ RLGNIDRLPK SLKVLLENLL RNEDGKTVQP
QDLQAMVDWL DKRASDREIQ YRPARVLMQD FTGVPAVVDL AAMRDAMAKA GGDPQRINPL
SPVDLVIDHS VMVDRYASSS AFHDNVELEM QRNGERYAFL RWGQHAFDNF SVVPPGTGIC
HQVNLEYLAR TVWTKEEDGV TLAFPDTLVG TDSHTTMING LGVLGWGVGG IEAEAAMLGQ
PVSMLIPEVI GFKLSGKLKE GITATDLVLT VTQMLRKKGV VGKFVEFYGD GLADLPLADR
ATIANMAPEY GATCGFFPVD EITLGYLRLS GRPDATVQLV EAYSKAQGLW REAGAEPLFT
DSLSLDLGSV EASLAGPKRP QDRVSLGQVS QAFDDFVGLQ LKPSAKEEGR LLSEGGGGTA
VGGDKQSGEI DYEDEGHTHR LKDGAVVIAA ITSCTNTSNP SVMMAAGLLA KKAVEKGLQR
QPWVKSSLAP GSKVVTEYFN AAGLTPYLEK LGFDLVGYGC TTCIGNSGPL REPIEKAITQ
ADLTVASVLS GNRNFEGRVH PLVKTNWLAS PPLVVAYALA GSVRLDLTRD ALGTGKDGQP
VYLKDIWPTQ AEIAQAIAQV DTAMFRKEYA EVFAGDEKWR AIDVPKADTY AWQGDSTYIQ
HPPFFEDIAG DPPRITDIRQ ARILALLGDS VTTDHISPAG NIKADSPAGR YLREHGVNRA
DFNSYGSRRG NHEVMMRGTF ANIRIRNEML GGEEGGNTLH VPSGEKLAIY DAAMRYQAEG
TPLVIIAGKE YGTGSSRDWA AKGTNLLGVK AVIAESFERI HRSNLVGMGV LPLQFKPGTD
RNSLRLSGRE VVAVEGLEGV ELRPQMPLTL IITREDGQHE EVEVLCRIDT LNEVEYFKAG
GILHYVLRQM IAS
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