| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1897 |
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| Symbol | |
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| ID | 5110025 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 2086629 |
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| End bp | 2087330 |
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| Gene Length | 702 bp |
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| Protein Length | 233 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640503128 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001187391 |
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| Protein GI | 146306926 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.143238 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 0.918847 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGAATCA TGGTGATCGG TGCGAGCCGA GGTCTCGGTC GTGCGTTGGT AGATGGCTTG
GCGGCAAACC ATGAGCTGAT CGGGATTTCA CGCAGCCGCC CCGTCGATCT CACTGCGGAT
ATCCAGTGGA TCGAAGCGGA TATGAGCGAT CCGCTACAGG CAGTCGAAGC CATCGAGACC
CAGGCGCCGC AGCGGCTGGA CGCGATCATC TACAACCTGG GTATCTGGGA AGCCCGTGCG
TTCGAGGATG ACTACAGCTT TCTGCAGGAC GACGACGCGC AGATTCTCGA GATGATCAGC
GTCAATATCG GCGCGACCTT GCTGCTGCTC AAACGCCTGC TACCGCGCCT GCTCGGCGGC
GCCAAGCCGC AATTGATCCT CACCGGTTCC ACCTCGGCCC TGCCACAGAG CGGCCGCCCG
GAAGTCACCT TCGGCGCCAG CAAGTTCGCT CTCAAGGGCA TTGCAGAGAC CCTGCGCGAA
GGCTTTCGCG ATCAGCGCCT GGCCGTCACC TGCCTGCAAC TGGGCTACCT CAATACCCAG
GATGGCCTGC AAACACCGGT TGAGCAGGCG GCGCGAAATG GCGAAGGTCA GCTGATTCCG
TTGCACGATG TCGTCGCCCT GGTACGAACG CTGCTGAGCC TGTCCGACGC CAGTTACGTG
CGTGAGCTGG TGCTGCCTGC CATCGCCGAC GAGCGCTTTT GA
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| Protein sequence | MRIMVIGASR GLGRALVDGL AANHELIGIS RSRPVDLTAD IQWIEADMSD PLQAVEAIET
QAPQRLDAII YNLGIWEARA FEDDYSFLQD DDAQILEMIS VNIGATLLLL KRLLPRLLGG
AKPQLILTGS TSALPQSGRP EVTFGASKFA LKGIAETLRE GFRDQRLAVT CLQLGYLNTQ
DGLQTPVEQA ARNGEGQLIP LHDVVALVRT LLSLSDASYV RELVLPAIAD ERF
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