| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1892 |
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| Symbol | |
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| ID | 5110021 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 2083258 |
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| End bp | 2084019 |
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| Gene Length | 762 bp |
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| Protein Length | 253 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640503124 |
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| Product | short chain dehydrogenase |
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| Protein accession | YP_001187387 |
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| Protein GI | 146306922 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4221] Short-chain alcohol dehydrogenase of unknown specificity |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.0109425 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 0.804466 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACAACA TTCTCATCAG TGGCGCGGCC TCGGGGATCG GCGCGGCCAC CGCGCGCCTG
TTTCATGCCC GCGGTTGGCG CGTCGGCCTG CTCGACATCG ATGCTTCGGC CCTGCGCGCG
CTGGCCGACG AGCTCGGCGG CGTCTGGCAT GCGCGGCTGG ACGTGACCGA CGCACAGGCG
GTGCAGGCGG CCCTGGCCGA GTTCTGCGGC CTGCACGACG GCCAGCTACG CCTGCTGTTC
AACGGAGCCG GCATCCTGCG TACCGGTGAC TTCGAGTCGA TCGAGCTGGA GCAGCACGCG
CGGCTGGTGC AGATCAACGT GCTGGGCGTG CTCAACCTCT GCCACGCCGC CTTTCCCTAT
CTGCGGGTAA CCGCTGGCGC GCAGGTGATC AACATGGGGT CGGCGTCGGC CGTCTACGGC
GTGCCGCAGC TGGCCAGCTA CTCGGCCAGC AAATTTGCCG TGCGCGGCCT GACCGAGGCG
TTGGAGCTGG AGTGGCGCCG TCATGGCATT CGTGTCGGCG ACCTGATGCC GCCGTTCGTC
AACACGCCGA TGGTCGCCAG CCAGGCCGAG CCACCGCCGG TGATGCGCCG CCTCGGCGTG
CATCTGCAGG CCGAACAGAT CGCCGCAGCC GCCTGGCAGC AGGCGCAGGG CGCTGCGCTA
CATCGCCCGG TAGGTCTGCA GTTCGGCCTG CTGTATGCCC TGGGACAGGT CACGCCCGGC
TGGATCAACA GGCTGCTGAT GAGCTGGCTG AGCCGGCCGT AG
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| Protein sequence | MDNILISGAA SGIGAATARL FHARGWRVGL LDIDASALRA LADELGGVWH ARLDVTDAQA
VQAALAEFCG LHDGQLRLLF NGAGILRTGD FESIELEQHA RLVQINVLGV LNLCHAAFPY
LRVTAGAQVI NMGSASAVYG VPQLASYSAS KFAVRGLTEA LELEWRRHGI RVGDLMPPFV
NTPMVASQAE PPPVMRRLGV HLQAEQIAAA AWQQAQGAAL HRPVGLQFGL LYALGQVTPG
WINRLLMSWL SRP
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