Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_1785 |
Symbol | |
ID | 5109365 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | + |
Start bp | 1957576 |
End bp | 1958100 |
Gene Length | 525 bp |
Protein Length | 174 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640503017 |
Product | hypothetical protein |
Protein accession | YP_001187281 |
Protein GI | 146306816 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.0605604 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 0.726112 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGAGAA GCTATCTGCG TCTGGCCTTG TTCGCCCTCG GTCTGCTGTT GGGCGTGCAG GTGCCGGGCT TCATCGACGA TTACGGCAAG CGCGTCGAGG CCCGCCGGCT GGAGTCGCAG CAGAGCCTGA AGGGCTTTCA GGACACTGCG CAGAAGTTCT TCAAGGGCGA TATGGATGCG CTGGTGGCGC ACTATCGCGT CAGCGACGAT CCGGTGATGC GCAGCGACGC GCAGAGCGTC GCGCATCTGG TGCAGCGCTC GGCCCTGCTG GAACGTGAAT GGCAGGCCAT GCAGGGGCCC TGGTACGCCC AGGCCTGGCA CCTGGCCACC GGCGCCGACC GCGATCTGCT CGGCGAGACC CTGCAGGCCT ACCGTTACCA GGTGCTGTTC ACCCCCGAGG CCATTCTCTG GGGCGTGATC TGCGCGCTGC TGCTGGCCTG GCTGGCCGAG CTGCTGGTGC TGCTGTTCGG CTGGATGCTC GGTGCCGGCC GGATCAGACG TACCCAGCAA CGTCACTGGC GCTGA
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Protein sequence | MLRSYLRLAL FALGLLLGVQ VPGFIDDYGK RVEARRLESQ QSLKGFQDTA QKFFKGDMDA LVAHYRVSDD PVMRSDAQSV AHLVQRSALL EREWQAMQGP WYAQAWHLAT GADRDLLGET LQAYRYQVLF TPEAILWGVI CALLLAWLAE LLVLLFGWML GAGRIRRTQQ RHWR
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