Gene Pmen_1785 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_1785 
Symbol 
ID5109365 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp1957576 
End bp1958100 
Gene Length525 bp 
Protein Length174 aa 
Translation table11 
GC content66% 
IMG OID640503017 
Producthypothetical protein 
Protein accessionYP_001187281 
Protein GI146306816 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.0605604 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value0.726112 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGAGAA GCTATCTGCG TCTGGCCTTG TTCGCCCTCG GTCTGCTGTT GGGCGTGCAG 
GTGCCGGGCT TCATCGACGA TTACGGCAAG CGCGTCGAGG CCCGCCGGCT GGAGTCGCAG
CAGAGCCTGA AGGGCTTTCA GGACACTGCG CAGAAGTTCT TCAAGGGCGA TATGGATGCG
CTGGTGGCGC ACTATCGCGT CAGCGACGAT CCGGTGATGC GCAGCGACGC GCAGAGCGTC
GCGCATCTGG TGCAGCGCTC GGCCCTGCTG GAACGTGAAT GGCAGGCCAT GCAGGGGCCC
TGGTACGCCC AGGCCTGGCA CCTGGCCACC GGCGCCGACC GCGATCTGCT CGGCGAGACC
CTGCAGGCCT ACCGTTACCA GGTGCTGTTC ACCCCCGAGG CCATTCTCTG GGGCGTGATC
TGCGCGCTGC TGCTGGCCTG GCTGGCCGAG CTGCTGGTGC TGCTGTTCGG CTGGATGCTC
GGTGCCGGCC GGATCAGACG TACCCAGCAA CGTCACTGGC GCTGA
 
Protein sequence
MLRSYLRLAL FALGLLLGVQ VPGFIDDYGK RVEARRLESQ QSLKGFQDTA QKFFKGDMDA 
LVAHYRVSDD PVMRSDAQSV AHLVQRSALL EREWQAMQGP WYAQAWHLAT GADRDLLGET
LQAYRYQVLF TPEAILWGVI CALLLAWLAE LLVLLFGWML GAGRIRRTQQ RHWR