Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_1652 |
Symbol | |
ID | 5109626 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | + |
Start bp | 1814226 |
End bp | 1815497 |
Gene Length | 1272 bp |
Protein Length | 423 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640502880 |
Product | hypothetical protein |
Protein accession | YP_001187148 |
Protein GI | 146306683 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.0487552 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 42 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCGCTCAC TTCGTAATTC CCGTGTTTTC CTTTGCTCCT TGACGCTCAT CCTGGCCTCG CTCTGGCTGT TGGCGATGCG GGCCGGCGCC GCACAAGAGC CTGACGGCGC CGTGGAGTTT CCCGTCTGGA GTCATTCCTT TGTTGGCACG CTGGGCAGTA AGCATGTCGA GGTCTCGCTG AGCCGTATTG CCGATGACCT TTCAGGCACC TACTGCTATC AGCCCTGCAG CAACCAGACG CCCAATCAGC TTGTGCTGCG GGGACGGGTG CGGGGGGATA GGGCGGAGTT GATCGAGCAT GATCTTGGGC ATAGGGCGAT CACTACGGGC GTCTGGATGA TCGAGTCACT CGATGGCGGT GTCACTGGCA TCTGGGGTTC GCCCGACGGC AAGCGCAGGT TGCCACTGGC CTTGCGCAAG GCCGAGTCTG CGGACGCGCT GCAAGCTCGC TTTCCCTACG ATGTACGTCT GCTCGCCGAC GCGCTGCCTG AGCTTCAGGG CGACGGTTGC CCGACGCCGC CACTCGTTTC GGCCATCCGT CTGTACAAGG ACGGCGTGTT GTTCCAGACC CTGGAAACCG AGTCCCAGGG GACCTGCAGC ATTTTCACGC CCGAGCTGTT AGATGCGAAC TTCGATGGTT GGCCGGATCT GAGCATTGCC CAGTTTCTCC CTGCTGGCCC CAACATTTCG CATCAGACCT GGCTCTATGA GCCTGCCTCG GCGCGTTTCG TCGATGCGCC AGCCACGCTG CAGGGTGTTA CCTCTCCTGA TTTCGACCCA GAGCATCAGG TCGTCTATTC CTTCTGGCGG GCAAGCTGCT GTGAGCATGG CGTATCGATA TACCGCTGGA AGGGCGGTGA CCTGGAGGAG GTCGATACCA AGAGCAGTTA CTTCCTGCCG GTGATGGATG GCGGCGTACG GCGCATTTGT TATATCGCGC CCGGTTACAA TGAGGGCTCC ATCGAGTATC CGGGGCGGGT TGAACAGACC GCCGATGGAC GCCTGAGGCT GCATCAGATC GACCTGAAAA CCTGTGAGGT CGACGACTGG ACGTTTCTGC AGCGAACCTA CATCGATATC TGGGAGCCCG CCCTGCCTGG GGAGAAACCG GTCCTGCTGC GCTCCGAAGG TGTCACCTGG ATCGCCACCG ATACAACCGC CGGCCAGCGC TATTGCCCCG AGGTGCCGTA CTTCGACAGC GGTCACATAC GGCGTGTGGT ACTCAGGGAT GATCCCGACT GGTGCACAAA AGAGCGTCCG TCACAGGAGT AG
|
Protein sequence | MRSLRNSRVF LCSLTLILAS LWLLAMRAGA AQEPDGAVEF PVWSHSFVGT LGSKHVEVSL SRIADDLSGT YCYQPCSNQT PNQLVLRGRV RGDRAELIEH DLGHRAITTG VWMIESLDGG VTGIWGSPDG KRRLPLALRK AESADALQAR FPYDVRLLAD ALPELQGDGC PTPPLVSAIR LYKDGVLFQT LETESQGTCS IFTPELLDAN FDGWPDLSIA QFLPAGPNIS HQTWLYEPAS ARFVDAPATL QGVTSPDFDP EHQVVYSFWR ASCCEHGVSI YRWKGGDLEE VDTKSSYFLP VMDGGVRRIC YIAPGYNEGS IEYPGRVEQT ADGRLRLHQI DLKTCEVDDW TFLQRTYIDI WEPALPGEKP VLLRSEGVTW IATDTTAGQR YCPEVPYFDS GHIRRVVLRD DPDWCTKERP SQE
|
| |