| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1650 |
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| Symbol | |
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| ID | 5109624 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 1812089 |
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| End bp | 1813039 |
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| Gene Length | 951 bp |
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| Protein Length | 316 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640502878 |
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| Product | AraC family transcriptional regulator |
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| Protein accession | YP_001187146 |
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| Protein GI | 146306681 |
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| COG category | [K] Transcription |
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| COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAGCCT TGCTGGTGAG CCAATCCGAA CCTGTCGCCT CTACTGACGC CCTGCGGATT
CCGGCCGAGG CCATGTGGCA ATACCTGCCG GATGGCCGCC CGGCACCGCC CCAGCCGCCT
GCCGCGCAGG ACGTGGTGCT GCACCTGTTC ACGCACCGCA GCATCGCCGA GCCGATTCTC
GTGCCGGCGG TGGCCGAACC GCTGCTGGTG ATGGTGCTGG CAGGGTCGGC CATCGTCGAA
GAACGCGTGG CGGGCGGCGA ATGGGAGCAA ACCGAGGTGC GCGTTGGCGA CTTCTTCCTC
ACCAGCACCA CACAACCCTA TGAAATGCGC TGGCAAACCA GAGCGGGCGA CAGCTTCGAA
GTGATGCATC TGTATCTCGC GCCTACGCTG ATCGACCGCG CCGCGCACGA CCTGGGGCTG
CAACAGGCCG GGACGGTAAG CTTCGTCGAC GTTTCCGGTG GCCGTGACGA CTGGGTACGC
ATGCTGCTCG AACAGTTGCG TACGGAGCTC ACCGGCAGCC GCACGCCGAG TCAGCTACTC
GTGCACAGCC TGGCCCAGGC GCTGGCGATT CATCTGGTGC GAACCTATCG CGCCCCACCG
GCCACAGGCA GACGCAGCAA CGCCCTGCAG GCCTACAAAC TGAGGCGCGT CGTCGACCTG
ATGAACCAGC ATCTGGCGCA AGACTTTTCC CTGTCCAGCC TCGCGCAAGC CGCACAACTG
AGCGAATACC ACTTCAGCCG GCTGTTCAAA CGCGCCACCG GGCTGTCGCC GTCGCGCTAC
TTCATTCGCC TGCGCATGGC ACGCGCTCGA CAACTGCTGC TGGAAACCGA CCACAGCGTG
ATCGATATCG GGCTGGAGGT GGGCTACTCG AGCGCCAGCC ATTTTTCGCA GGTCTTTCGC
CGCGAAGTGG GCATAACGCC GAGCGCCTAC CGCGATCCGG GGCGGGATTG A
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| Protein sequence | MEALLVSQSE PVASTDALRI PAEAMWQYLP DGRPAPPQPP AAQDVVLHLF THRSIAEPIL
VPAVAEPLLV MVLAGSAIVE ERVAGGEWEQ TEVRVGDFFL TSTTQPYEMR WQTRAGDSFE
VMHLYLAPTL IDRAAHDLGL QQAGTVSFVD VSGGRDDWVR MLLEQLRTEL TGSRTPSQLL
VHSLAQALAI HLVRTYRAPP ATGRRSNALQ AYKLRRVVDL MNQHLAQDFS LSSLAQAAQL
SEYHFSRLFK RATGLSPSRY FIRLRMARAR QLLLETDHSV IDIGLEVGYS SASHFSQVFR
REVGITPSAY RDPGRD
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