| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1644 |
|---|
| Symbol | |
|---|
| ID | 5109618 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas mendocina ymp |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009439 |
|---|
| Strand | + |
|---|
| Start bp | 1805479 |
|---|
| End bp | 1805802 |
|---|
| Gene Length | 324 bp |
|---|
| Protein Length | 107 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 640502872 |
|---|
| Product | protein tyrosine phosphatase-like protein |
|---|
| Protein accession | YP_001187140 |
|---|
| Protein GI | 146306675 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4551] Predicted protein tyrosine phosphatase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 0.294535 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 40 |
|---|
| Fosmid unclonability p-value | 0.798793 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGATCCGCG CACTGTTCAT CTGCAGTCGC AACCGCTTGC GCAGCCCGAC CGCCGAGCAG
CTGTTCGGCT CCTGGCCGGG TGTCGAAACC GATTCCGCCG GCTTGGCGCC GGACGCCGAG
GTGCGCCTGT CGGCCGAGCA GGTCCAGTGG GCCACGCTGA TTCTGGTGAT GGAGAAGCGC
CACCGCAGCC GATTGATGCG CCAATACCGC CAGGCACTGG CGGGCAAGCG CGTGATCTGC
CTGGATATCC CCGATGACTA CGCCTACATG CAGCCGGAGC TGATCGAACT GTTGCAGCGC
AAGGTGACCG GGCTGCTGCG CTGA
|
|---|
| Protein sequence | MIRALFICSR NRLRSPTAEQ LFGSWPGVET DSAGLAPDAE VRLSAEQVQW ATLILVMEKR
HRSRLMRQYR QALAGKRVIC LDIPDDYAYM QPELIELLQR KVTGLLR
|
|---|
| |