| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1594 |
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| Symbol | |
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| ID | 5109252 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 1758467 |
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| End bp | 1759933 |
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| Gene Length | 1467 bp |
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| Protein Length | 488 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640502822 |
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| Product | glyceraldehyde-3-phosphate dehydrogenase |
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| Protein accession | YP_001187090 |
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| Protein GI | 146306625 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0057] Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase |
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| TIGRFAM ID | [TIGR01534] glyceraldehyde-3-phosphate dehydrogenase, type I |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 0.153434 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTGGAAGG TACTGCCCGT GACTCAGAAG CCCGACCAGT GTCTCGGTGA ATGGATCGAT
CGTGAAGCCC TCGCGGAAGC GATGATTCCG CTGATTGGTC AGCTCTATCG CAACAACAAT
GTGGTGACCT CGATCTACGG CCGTGGCCTG ATCAATCGTT CGGTCATCGA CATCCTCAAG
GCTCACCGTT TCGCTCGCCA TCGCCTGGCC GATGAGGCCG AACTGTCGGT CCACGACACC
TTCCCCATGC TCAAGGCGAT GAGCGAGCTC AAGCTGGGCG CCGCCTCCGT CGACCTGGGC
AAGCTGGTTG CCAAGTTCAA GGCCGAAGGC GCTGGCCGCG CTGTCGAGCA GTTCGTCAAG
GATGAGCTGG CCGAGGTGGT TGGCAAGCAG AACGGCGCTG CCCGCGAAGG CACCGATGTG
GTGCTCTACG GTTTCGGTCG TATCGGCCGT CTGCTGGCGC GCATCCTGAT CGAGAAGACC
GGTGGCGGCG ACGGCCTGCG TCTGCGTGCC ATCGTCGTGC GCAAGGGTGC CAGCAACGAT
CTGGTCAAGC GTGCCAGCCT GCTGCGTCGT GACTCGGTGC ACGGCAAGTT CAACGGCACC
ATCACCATCG ATGAAGAGAA CAACACCCTG ACGGCCAACG GCAACCTGAT CCAGGTGATC
TACGCCAAGG ACCCGAAGGA AGTCGATTAC ACCCAGTACG GTATCAAGAA CGCGCTGCTG
GTGGACAACA CCGGCGTATG GCGTGATGCC GAGGGTCTGG GTCAGCACCT GGCCTGCCCG
GGCGTCGATC GTGTGGTGCT CACTGCGCCT GGCAAGGGCG CGCTGAAGAA CATCGTGCAC
GGCATCAACC ACAGCGAAAT CACCGCTGAG GACAAGATCA TCTCCGCGGC TTCCTGCACC
ACCAACGCCA TCGTGCCGGT GCTCAAGGCG GTCAACGACA AGTACGGCAT CGTCAACGGT
CACGTCGAGA CCGTTCACTC CTACACCAAC GACCAGAACC TGATCGACAA CTTCCACAAG
GGCAGTCGTC GTGGTCGCAG TGCCGCGCTG AACATGGTCA TCACCGAAAC CGGCGCTGCC
ACCGCTGCGG CCAAGGCGCT GCCGGTGCTC AAGGGCAAGC TGACCGGCAA CGCCATTCGT
GTGCCGACGC CGAACGTGTC CATGGCCATT CTCAACCTGA ACCTGGAGAA GGCCACCACT
CGCGAAGAGA TCAACGAGTA CCTGCGTCAG ATGGCCATGC ACTCGGATCT GCAGAAGCAG
ATCGATTTCG TCAGCTCGCA GGAAGTGGTG TCCACCGACT TCGTCGGTTC GCGTCACGCC
GGTGTGGTCG ATGCCGAAGC CACCATCGCC AACGACAATC GCGTCGTTCT CTATGTCTGG
TACGACAACG AGTTCGGCTA CAGCTGCCAG GTGGTGCGTG TGATGGAAGA CATGGCCGGG
GTGAACCCGC CTGCCTTCCC GCGCTAA
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| Protein sequence | MWKVLPVTQK PDQCLGEWID REALAEAMIP LIGQLYRNNN VVTSIYGRGL INRSVIDILK
AHRFARHRLA DEAELSVHDT FPMLKAMSEL KLGAASVDLG KLVAKFKAEG AGRAVEQFVK
DELAEVVGKQ NGAAREGTDV VLYGFGRIGR LLARILIEKT GGGDGLRLRA IVVRKGASND
LVKRASLLRR DSVHGKFNGT ITIDEENNTL TANGNLIQVI YAKDPKEVDY TQYGIKNALL
VDNTGVWRDA EGLGQHLACP GVDRVVLTAP GKGALKNIVH GINHSEITAE DKIISAASCT
TNAIVPVLKA VNDKYGIVNG HVETVHSYTN DQNLIDNFHK GSRRGRSAAL NMVITETGAA
TAAAKALPVL KGKLTGNAIR VPTPNVSMAI LNLNLEKATT REEINEYLRQ MAMHSDLQKQ
IDFVSSQEVV STDFVGSRHA GVVDAEATIA NDNRVVLYVW YDNEFGYSCQ VVRVMEDMAG
VNPPAFPR
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