| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1510 |
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| Symbol | |
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| ID | 5108461 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 1669065 |
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| End bp | 1670003 |
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| Gene Length | 939 bp |
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| Protein Length | 312 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640502739 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001187007 |
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| Protein GI | 146306542 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.451093 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 0.28121 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAGACCT TGGCTAATTT GGAGTCTTTC GTGCGCAGCG CCGAGTGCGG TAGCTTCTCC
GCAGCCGCAC GTCGCCTGGG TCTGACGCCG GCTGCCATCA GCCGCAACGT GGCTCAGCTG
GAAAGCAACC TCGGAGTGCG ACTGTTTCAG CGCAGCACCC GACGCCTGAC CCTGACTGAA
GCCGGCGAGC GCTTTCTCGG CAATGTGGGC GGCGGGCTTG AAAGCATCCA GGCGGCGATT
GCCGATCTCA CCACTAGCGC CGGTGCCCCT GCCGGGATGC TGCGCCTGTC GGCGGCACCT
GCCTTTGGGC GCGACTATCT ACTCCCCCTG ATGCCCGAGT TCTTGGCCCG CTATCCGGCA
GTCTCGCCGG AATGGCATTT CGACAACCGC CAGGTAGAGC TGATTACCGA TGGCTTTGAT
GCGGCTATTG GTGGCGGTAT CGAGTTAACG CCTGGCGTGG TGGCGCGCGA ACTGGCACCA
GCGCATCTGG TAATGGTTGC TTCGCCAGCC TACTTAGCCG GAAGGCCAGC ACCACGTCAG
CCAGGCCAGC TCGCCGAAAT CGACCACTTG GGCATGCGGT CGGCTCAGAG CGGCAAGGTA
CGCAGCTGGA TGCTGCAGAA CTCCAAGGGC GAGCGAGCTC CGCTGGAGCT ACGACCGAGG
ATGCTAGTAA ACGACCCTCA AGCACTGTGT CAGAGCGCCT TGCTCGGGCT TGGCGTGGCC
CTGCTTGCCG TACCGGATGT GCTGGCGCAT CTGCAAAGCG GTGCACTGCA ACGTGTCTTG
CCGGACTGGT ATGTCGATGC CGGCCCCATC TCGCTCTACT TTGCCAGCCA GAAGCTGTTA
CCGGCCAAGA CACGGGCGTT CATTGATCAC CTGGTCGAGT ATTCCCGTAA TCAGAAGTGG
GGAAGACGGT TCGATGCGAG GTTTGTAGCG AATAGCTAA
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| Protein sequence | METLANLESF VRSAECGSFS AAARRLGLTP AAISRNVAQL ESNLGVRLFQ RSTRRLTLTE
AGERFLGNVG GGLESIQAAI ADLTTSAGAP AGMLRLSAAP AFGRDYLLPL MPEFLARYPA
VSPEWHFDNR QVELITDGFD AAIGGGIELT PGVVARELAP AHLVMVASPA YLAGRPAPRQ
PGQLAEIDHL GMRSAQSGKV RSWMLQNSKG ERAPLELRPR MLVNDPQALC QSALLGLGVA
LLAVPDVLAH LQSGALQRVL PDWYVDAGPI SLYFASQKLL PAKTRAFIDH LVEYSRNQKW
GRRFDARFVA NS
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