Gene Pmen_1500 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_1500 
Symbol 
ID5108451 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp1661244 
End bp1661546 
Gene Length303 bp 
Protein Length100 aa 
Translation table11 
GC content55% 
IMG OID640502729 
ProductArsR family transcriptional regulator 
Protein accessionYP_001186997 
Protein GI146306532 
COG category[K] Transcription 
COG ID[COG0640] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.574004 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value0.560617 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACTGA TCAACGTATT CAAAGCCCTT TCGAATCCTA CCCGCCTTGA AATCCTCAAG 
GGGCTGAAGG ACCCGGTGAA GAACTTTCCT CCGCAGGATG AAGGGGACGT TCATACGGTG
GGCGTCTGCG TCAGCAGCAT TCAGGAAGGC GTCGGTCTCT CGCAATCGAC GGTTTCCGAT
TACCTGGCAA CGCTGCAGCG AGTGGGTCTG GTCGAAGTGC GTCGTATCGG TCAGTGGACC
TACTACAAGC GCAACGAAGC GAACATCCGT GCTCTGGTCG AGCTCATAGG CAAAGAGCTG
TAA
 
Protein sequence
MELINVFKAL SNPTRLEILK GLKDPVKNFP PQDEGDVHTV GVCVSSIQEG VGLSQSTVSD 
YLATLQRVGL VEVRRIGQWT YYKRNEANIR ALVELIGKEL