| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1472 |
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| Symbol | |
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| ID | 5109761 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 1633146 |
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| End bp | 1634945 |
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| Gene Length | 1800 bp |
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| Protein Length | 599 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640502701 |
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| Product | GTP-binding protein LepA |
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| Protein accession | YP_001186969 |
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| Protein GI | 146306504 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0481] Membrane GTPase LepA |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR01393] GTP-binding protein LepA |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.860925 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 55 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGTGACC TGAGTCATAT CCGCAATTTT TCCATCATTG CCCACATTGA CCACGGCAAG
TCCACCCTGG CTGACCGTTT CATCCAGATG TGCGGCGGCC TTGCCGCGCG CGAAATGGAG
GCTCAGGTCC TGGACTCCAT GGACCTGGAG CGTGAGCGCG GCATCACCAT CAAGGCCCAC
AGCGTCACCC TTCACTACAA GGCGAAGGAC GGCAAGACCT ATCAGCTGAA CTTCATCGAT
ACGCCCGGCC ACGTCGACTT CACCTACGAA GTCTCGCGTT CGCTGGCGGC CTGCGAGGGC
GCGCTGCTGG TGGTCGATGC CGGTCAGGGC GTCGAGGCGC AGTCGGTCGC CAACTGCTAC
ACCGCCATCG AGCAGGGCCT CGAGGTCATG CCGGTGCTGA ACAAGATGGA CCTGCCGCAG
GCCGATCCGG ACCGCGTCAA GGACGAGATC GAGAAGATCA TCGGCATCGA CGCCACCGAC
GCCGTGGCCT GCAGCGCCAA GAGCGGCATG GGCGTGGACG AGGTGCTCGA GCGCCTGGTG
CAGACCATTC CTGCACCGAC CGGTGATATC GAAGCGCCGC TGCAGGCGCT GATCATCGAC
TCCTGGTTCG ACAACTACCT GGGCGTGGTC TCGCTGGTGC GCGTGCGCCA GGGTCGCGTC
AAGAAAGGCG ACAAGATCCT GGTCAAGTCC ACCGGCAAGG TGCACCTGGT CGACAGCGTC
GGTGTCTTCA CCCCGAAACA CACCGCCACC GCCGATCTCA AGGCCGGTGA AGTGGGCTTC
ATCATCGCCA GCATCAAGGA CATTCACGGT GCGCCGGTGG GCGACACCCT GACCCTGTCC
TCGACCCCCG AGGTCGAAGT GCTGCCGGGC TTCAAGAAGA TCCAGCCGCA GGTCTACGCC
GGTCTGTTCC CGGTCAGCTC AGACGATTTC GAGGACTTCC GCGATGCGCT GCAGAAGCTG
ACCCTCAACG ACTCGTCGCT GCAGTACATG CCGGAAAGCT CCGATGCCCT GGGCTTCGGT
TTCCGTTGCG GTTTCCTCGG CATGCTGCAC ATGGAGATCA TCCAGGAGCG CCTGGAACGC
GAGTACGATC TGGACCTGAT CACCACCGCG CCGAGCGTGA TCTACGAGCT CGAGCTCAAG
ACAGGTGAAA CCATCACCGT CGACAACCCG TCCAAGCTGC CGGACGTTTC GTCCGTCGCC
GATTTCCGTG AGCCGATCGT CACCGCGACC ATTCTTGTGC CGCAGGAGCA CTTGGGTAAC
GTCATCACCC TGTGCATCGA GAAGCGCGGC GTGCAGCGCG ACATGCAGTT CCTCGGGTCT
CAGGTACAGG TTCGCTACGA CCTGCCGATG AACGAGGTGG TGCTGGACTT CTTCGACCGT
CTGAAGTCGA CCAGCCGTGG TTATGCGTCG CTGGACTATC ATTTCGACCG CTACCAGTCT
GCCAACCTGG TCAAGCTGGA CGTACTGATC AACGGTGACA AGGTCGATGC CCTGGCATTG
ATCGTGCATC GCGACAACGC GGCCTACAAG GGCCGTGCGT TGACCGAGAA GATGAAGGAA
CTGATCCCTC GGCAGATGTT CGACGTGGCG ATCCAGGCAG CCATTGGCGG CCAGATCATC
GCGCGGACCA CTGTCAAGGC GCTCAGAAAG AACGTGCTGG CCAAGTGCTA CGGTGGCGAC
GTGAGCCGTA AGAAGAAGCT GCTGGAGAAG CAGAAGGCCG GTAAGAAACG CATGAAGCAG
GTCGGTAACG TGGAAATCCC ACAGGAAGCC TTCCTCGCTG TGCTCAGGTT GGATAGCTAA
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| Protein sequence | MSDLSHIRNF SIIAHIDHGK STLADRFIQM CGGLAAREME AQVLDSMDLE RERGITIKAH
SVTLHYKAKD GKTYQLNFID TPGHVDFTYE VSRSLAACEG ALLVVDAGQG VEAQSVANCY
TAIEQGLEVM PVLNKMDLPQ ADPDRVKDEI EKIIGIDATD AVACSAKSGM GVDEVLERLV
QTIPAPTGDI EAPLQALIID SWFDNYLGVV SLVRVRQGRV KKGDKILVKS TGKVHLVDSV
GVFTPKHTAT ADLKAGEVGF IIASIKDIHG APVGDTLTLS STPEVEVLPG FKKIQPQVYA
GLFPVSSDDF EDFRDALQKL TLNDSSLQYM PESSDALGFG FRCGFLGMLH MEIIQERLER
EYDLDLITTA PSVIYELELK TGETITVDNP SKLPDVSSVA DFREPIVTAT ILVPQEHLGN
VITLCIEKRG VQRDMQFLGS QVQVRYDLPM NEVVLDFFDR LKSTSRGYAS LDYHFDRYQS
ANLVKLDVLI NGDKVDALAL IVHRDNAAYK GRALTEKMKE LIPRQMFDVA IQAAIGGQII
ARTTVKALRK NVLAKCYGGD VSRKKKLLEK QKAGKKRMKQ VGNVEIPQEA FLAVLRLDS
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