Gene Pmen_1442 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_1442 
Symbol 
ID5109731 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp1606264 
End bp1606593 
Gene Length330 bp 
Protein Length109 aa 
Translation table11 
GC content66% 
IMG OID640502671 
Productputative monovalent cation/H+ antiporter subunit C 
Protein accessionYP_001186939 
Protein GI146306474 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1006] Multisubunit Na+/H+ antiporter, MnhC subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.312329 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGGCTA TGTTCGCGAT CACCCTTGGG GTACTGGCGG CCAGTGGCGT CTACCTGCTG 
CTGCGGGCGC GCATCTTCCC GGTGGTGATG GGCCTGACCC TGATTTCCTA TGCGGTCAAC
CTGTTCATCT TCGCCACGGG GCGGCTGGGC ACCGGCGTGC CGGCGGTGAT CGGCAAGAGC
GCCGAATACG GCGACCCGCT GCCGCAGGCG CTGGTGCTGA CCGCCATCGT AATCGGCTTC
GCCATGACCG CTTTCGTCGT GGTGCTGGCC CTGCGCGGCC TGGGTGAGTT GAAAACCGAT
CACGTCGATG GCGAGGAGCC GCGCGCATGA
 
Protein sequence
MEAMFAITLG VLAASGVYLL LRARIFPVVM GLTLISYAVN LFIFATGRLG TGVPAVIGKS 
AEYGDPLPQA LVLTAIVIGF AMTAFVVVLA LRGLGELKTD HVDGEEPRA