| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1441 |
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| Symbol | |
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| ID | 5109730 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 1603470 |
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| End bp | 1606262 |
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| Gene Length | 2793 bp |
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| Protein Length | 930 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640502670 |
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| Product | putative monovalent cation/H+ antiporter subunit A |
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| Protein accession | YP_001186938 |
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| Protein GI | 146306473 |
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| COG category | [C] Energy production and conversion
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG1009] NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit
[COG2111] Multisubunit Na+/H+ antiporter, MnhB subunit |
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| TIGRFAM ID | [TIGR00943] monovalent cation:proton antiporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 0.963541 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGCTTG CGCTGATTGT CGCCTTGCCA TTTCTTGGAT TGTTTCTGCC GGTACTGGCC
GACCGGCTGG GGCGCTCCGC CTGCGCCGTG GCCGCTGCCG TGGCGCCCGT GTTGGCGTTG
GTCCTGCTGT TCAACTATCA GCCGGCGGTG TTTGCCGGCG AGGTGCTGCG GGTCAAGCTG
GAGTGGCTAC CCCACCTGGG CCTGAATCTC AGCCTGCGCC TCGATGGCCT GGGCTTCCTG
TTCGCCCTGC TGATCCTCGG CATCGGCCTG CTGGTGATCC TCTACGCCCG CTACTACCTG
GCCAAGACCG AGCCGATGGG GCGTTTCTTC GCCTTCCTGC TGCTGTTCAT GGGCGCCATG
CTCGGGGTGG TGCTGTCGGA AAACCTGCTG CTGATGCTGA TGTTCTGGGA GCTGACCAGC
CTGTCGTCGT TCCTGCTCAT CGGTTTCTGG GGCTCGCGAT CCGATGCCCG CAAGGGCGCG
CGCATGGCCC TGGCGATCAC CGGTGGCGGA GGGCTGGCGC TACTTGCCGG GATTCTGCTG
CTCGGCCATA TCGCCGGCAG TTTCGAGCTG TCCCAGGTGC TGGCCGCCGG CTACGCGATT
CGCGCCCACG AACTCTATCC GTTGACTCTG GCCCTGGTGC TGCTGGGCGT GTTCACCAAG
TCGGCGCAGT TCCCGTTCCA TTTCTGGCTG CCGCACGCCA TGGCTGCGCC GACGCCGGTT
TCGGCCTATC TGCACTCGGC GACCATGGTC AAGGCCGGCG TGTTCCTGCT GGCGCGTCTG
TACCCGGCGC TGGCCGGTTC CGAGTGGTGG TTCTACATGG TCAGCCTGAC CGGCCTGGCC
ACGCTGCTGG TGGGCGCGGG CATGGCGCTG TTCCAGCATG ACCTCAAGGG GCTGCTGGCC
TACTCGACCA TCAGCCACCT GGGCCTGATC ACCCTGCTGT TCGGTCTGGA TACCCGCCTG
GCCGCGGTCG CCGCGGTGTT CCACATCATC AACCACGCGA CCTTCAAGGC GTCGCTGTTC
ATGGCGGCGG GCATCATCGA TCACGAAACC GGCAGCCGCG ACATGCGCCG CATCAACGGC
TTGTGGAAGT ACATGCCGCA CACCGCCGTG CTGGCCATGG TGGCCGCTTC GGCCATGGCT
GGGGTGCCGC TGCTCAACGG CTTCCTGAGC AAGGAGATGT TCTTCACCGA AACCCTGCAC
CAGCACCTGC TGGGCGGCTT CAACTGGGTG ATTCCGGCTG CCGCGACCCT GGCCGGCGTG
TTCTCGGTGG CCTATTCGCT GCGTTTCATC CACGACGTGT TCTTCAACGG CGAGCCGCTC
GATCTGCCCA AGTACCCACC GCACGAGCCG CCGCGCTACA TGAAGGTGCC GGTGGAAGTA
TTGGTGTTTC TCTGCCTGCT GGTCGGCGTG GTGCCGGCCT ACACCGTGGC GCCGCTGCTG
GCCGCGGCGG CCACTTCCAC CCTGGGTGGC GACCTGCCGG AGTACAGCCT GGCGATCTGG
CACGGCTTCA ATCTGCCGCT GCTGATGAGC TTCATCGCGC TGTTCGGCGG CATCCTCGTC
TACGCCTGCC GCAAGCCGCT GTTCCGTTGG TACGAGGGGC TGCCAAACCT GGATGCCAAG
GACGTGTTCG ATCAGGTGGT GCGCTACCTG ACCCGCATGT CGGTGCGCAT CACCACGTTT
CTGGAGTGCG GGTCGCTGCA GCGTTACCTG GCCTGGATGA TCGGCAGCGC CCTGACTCTG
GTGGTGGTGG CGCTGTCCCC GCTCGACAGC CTCAGCGGTA GCGTGGCGAT GACTCCGCTC
GATCCCCTGA CCGTGATCGG CATGCTGATC CTGATGGTGA CCGCGGTGCT GACGGTGATC
TTCCACCGTC GCCGACTGGT GGCGCTGATC ATTCTCAGCG GTGCCGGTCT GATGGTGGCG
CTGGCCTTCG CCCGCTTCTC CGCCCCGGAT CTGGCGCTGA CCCAGCTGTC GGTGGAGGTG
GTGACAATCA TCCTGCTGAT GCTCATCCTG TACTTCATGA GCGACCGCAC GCCGGCCGAA
TCCAGCAGCC TGCGCGGGCT GCGCGACCTG GTCCTGGCGC TGGGCAGCGG CACCATGGTG
GCGATGCTGA CCTACGCCGT GCTGACCCGG CCGTATCAGA GCATCTCCTC GTTCTTCCTC
GAGAACAGCG TTTCCGGAGG CGGGGGGACC AACGTGGTCA ACGTGATCCT GGTGGACTTC
CGCGGCTTCG ATACCCTGGG CGAGATCACC GTGCTGGCGA TTGCCGCCAT CGGTATCTAT
GCCTTGCTGC ACAGCCTGCG CCTGCCGCAC CCGACCCACG ACAAGAACGG TCGCCCCTGG
TCCAGCGATG CCCACCCGAT GATTCTCGAC AACCTGGCCC GCGCCATGCT GCCGATGGCG
CTGCTGATCT CGGTGTTCAT CTTCCTGCGT GGCCACAACC TGCCGGGCGG CGGCTTCATC
GCCGGTCTGA TCACCTCGGT GGCGTTGATT CTGCAGTACA TCTCGCATGG CGTGACCTGG
ACCCAGGAGC GCCTGAAGTT CAGCTATCAC GCCACCGCCG GCTGGGGCGT GCTGATCGCC
GGTCTCACCG GTCTGGGCAG CTGGGCCTTC GGTTCGCCGT TCCTGACCTC GGCGTTCGGC
CATTTCCATA TTCCGCTGAT CGGCGAAATC GAACTGGCCA CCGCCATTCT CTTCGATCTC
GGGGTGTATC TGGCCGTTGT CGGCGCCACC CTGCTGATCC TTTCCAACAT CGGCCATGTC
AGTCAGGACG AGTCGTGCAA GGAGGTCATC TGA
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| Protein sequence | MALALIVALP FLGLFLPVLA DRLGRSACAV AAAVAPVLAL VLLFNYQPAV FAGEVLRVKL
EWLPHLGLNL SLRLDGLGFL FALLILGIGL LVILYARYYL AKTEPMGRFF AFLLLFMGAM
LGVVLSENLL LMLMFWELTS LSSFLLIGFW GSRSDARKGA RMALAITGGG GLALLAGILL
LGHIAGSFEL SQVLAAGYAI RAHELYPLTL ALVLLGVFTK SAQFPFHFWL PHAMAAPTPV
SAYLHSATMV KAGVFLLARL YPALAGSEWW FYMVSLTGLA TLLVGAGMAL FQHDLKGLLA
YSTISHLGLI TLLFGLDTRL AAVAAVFHII NHATFKASLF MAAGIIDHET GSRDMRRING
LWKYMPHTAV LAMVAASAMA GVPLLNGFLS KEMFFTETLH QHLLGGFNWV IPAAATLAGV
FSVAYSLRFI HDVFFNGEPL DLPKYPPHEP PRYMKVPVEV LVFLCLLVGV VPAYTVAPLL
AAAATSTLGG DLPEYSLAIW HGFNLPLLMS FIALFGGILV YACRKPLFRW YEGLPNLDAK
DVFDQVVRYL TRMSVRITTF LECGSLQRYL AWMIGSALTL VVVALSPLDS LSGSVAMTPL
DPLTVIGMLI LMVTAVLTVI FHRRRLVALI ILSGAGLMVA LAFARFSAPD LALTQLSVEV
VTIILLMLIL YFMSDRTPAE SSSLRGLRDL VLALGSGTMV AMLTYAVLTR PYQSISSFFL
ENSVSGGGGT NVVNVILVDF RGFDTLGEIT VLAIAAIGIY ALLHSLRLPH PTHDKNGRPW
SSDAHPMILD NLARAMLPMA LLISVFIFLR GHNLPGGGFI AGLITSVALI LQYISHGVTW
TQERLKFSYH ATAGWGVLIA GLTGLGSWAF GSPFLTSAFG HFHIPLIGEI ELATAILFDL
GVYLAVVGAT LLILSNIGHV SQDESCKEVI
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