Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_1373 |
Symbol | |
ID | 5109426 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | - |
Start bp | 1538114 |
End bp | 1539217 |
Gene Length | 1104 bp |
Protein Length | 367 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640502602 |
Product | enoyl-CoA hydratase/isomerase |
Protein accession | YP_001186870 |
Protein GI | 146306405 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1024] Enoyl-CoA hydratase/carnithine racemase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.502408 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 0.0715263 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACCTGC AATTCGAAGA ACGCCCCAGC CTGCATGGCT ACCGCATCGG CATCGCCAGC CTGGACGCCG AGAAGAGCCT CAACGCTCTC ACCCTGCCGA TGATCCAGGC GCTCGATGCG CGCCTGCAAG CCTGGGCCGA AGACCCGACC ATCGCCTGCG TGATGCTGCG CGGCAACGGC CCGAAAGCCT TCTGCGCCGG CGGCGACGTG GTGCAGCTGG TGCAGCAGTG CCGCGAACAC CCCGGTGAGG TGCCGCCGCT GGCGCGGCGC TTCTTCGCCG ACGAATACCG CCTCGACCAC CGCATCCACA GCTACCCCAA ACCCTTCATC TGCTGGGCCC ACGGCCACGT GCTGGGCGGC GGCATGGGCC TGATGCAGGG CGCCGGCGTC CGCATCGTCA CGCCGAGCAG CCGACTGGGC ATGCCGGAAA TCAATATCGG CCTGTATCCG GATGTCGGCG GCAGCTGGTT CCTTGCCCGC CTGCCGGGGC GTCTGGGCCT GTTTCTCGGC CTCACCGCCG CCAGCATCAA CGCCCGCGAT GCGCTGGACC TGAACCTGGC CGACCGCTTT CTGCGTGACG ACCAGCAGGA CGCCCTGCTC GAAGGCCTGG TGCAGCTGAA CTGGCGCGAG CAGCCGGCCG CGCAACTGCA CAGCCTGCTG CGCGCACTGG AGAACGAGGC GCGCGGCGAA CTGCCGGCGG CCCAGTGGCT GCCGCGCCGC GAGCGTATCG ACGAGCTGCT CGATGTCGCC GACCTGCCGG CGGCGGTTCA GGCCATCAGC GCCCTGCAGC AGGATGACGA CGCCCTGCTC GCCCGCGCCG CCAAGACCCT GGCCCACGGC TGCCCGCTGA CCGCGCACCT GGTGTGGCAG CAGATCCGCC GCGCGCGGCA CCTGTCGCTG GCCGAGGTGT TCCGCATGGA ATACGCCATG AGCCTGAATT GCTGCCGCCA CCCGGACTTC CCCGAAGGCG TGCGCGCTCG CCTGATCGAC AAGGACCAGA CGCCGCACTG GCATTGGCCG GACGTAGCCG CGATTCCCGA GGCGGTGATC GAAGCGCATT TCGCCCCGGC CTGGGAGGGT GAACATCCGT TGGCGGATCT GTAG
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Protein sequence | MNLQFEERPS LHGYRIGIAS LDAEKSLNAL TLPMIQALDA RLQAWAEDPT IACVMLRGNG PKAFCAGGDV VQLVQQCREH PGEVPPLARR FFADEYRLDH RIHSYPKPFI CWAHGHVLGG GMGLMQGAGV RIVTPSSRLG MPEINIGLYP DVGGSWFLAR LPGRLGLFLG LTAASINARD ALDLNLADRF LRDDQQDALL EGLVQLNWRE QPAAQLHSLL RALENEARGE LPAAQWLPRR ERIDELLDVA DLPAAVQAIS ALQQDDDALL ARAAKTLAHG CPLTAHLVWQ QIRRARHLSL AEVFRMEYAM SLNCCRHPDF PEGVRARLID KDQTPHWHWP DVAAIPEAVI EAHFAPAWEG EHPLADL
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