| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1313 |
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| Symbol | rdgC |
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| ID | 5109129 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 1473030 |
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| End bp | 1473995 |
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| Gene Length | 966 bp |
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| Protein Length | 321 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640502539 |
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| Product | recombination associated protein |
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| Protein accession | YP_001186810 |
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| Protein GI | 146306345 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG2974] DNA recombination-dependent growth factor C |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.00120294 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGCTGC CTGCGACCTC AACACCAATG GAGATTCACC CGCTCATGTG GTTTCGTAAC
CTGCTGGTCT ACCGCCTCAC TCAGGACATC CCTTTCGACG CCGACGCGCT GGAGACCGCA
CTGGCCAGCA AGCCGGCGCG CCCCTGCGCC AGCCAGGAGC TGACCACTTA CGGATTCACC
GCCCCCTTCG GCAAAGGCGG CGACGCGCCC CTGGTGCACG TCAGTGGCGA CTTCCTGCTG
ATCGGCACGC GCAAGGAAGA GCGCATCCTG CCTGGCTCGG TGGTGCGCGA CGCGCTGAAG
GAAAAGGTCG ACGAGATCGA AAACACGCAG ATGCGCAAGG TGTACAAGAA GGAGCGCGAT
CAGATCAAAG ACGAGATCGT CCAGGCCTTC CTGCCGCGCG CCTTCATTCG CAAATCCGGC
ACCTTCGCCG CCATCGCGCC GAAACAGGGC CTGATCCTGG TCGACAGTGC CAGCGCCAAG
AAGGCCGAGG ACCTGCTTTC CACCCTGCGC GAAGCCATCG GCTCGCTGCC GGTACGTCCA
CTGTCGGTGA AGATTGCGCC GACCGCCACC CTCACCGACT GGCTGAAAAC GCAGAAGGCC
GCCGAAGGCT TCTACGTGCT CGACGAGTGC GAGCTGCGCG ATACCCATGA GGACGGCGGC
GTGGTGCGCT GCAAGCGCCA GGACCTGACC AGCGAGGAAA TCCAGCTGCA CCTGTCCACC
GGCAAGCAGG TCACCCAGCT GTCGCTGGCC TGGCAGGACA AGCTGTCCTT CGTGCTCGAC
GAGAAGCTGA CCATCAAGCG TCTGCGCTTC GAAGACGTGC TGCAGGAGCA GGCCGAACAG
GACGGCGGCG ACGACGCCCT GGCCCAGCAG GACGCCAGCT TCATCCTGAT GATGATGACC
CTGGTGGAGT TCCTGCCGGA GCTGTTCACC GCACTGGGTG GCGAAGAGAT TCCGCAAGGC
ATCTGA
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| Protein sequence | MALPATSTPM EIHPLMWFRN LLVYRLTQDI PFDADALETA LASKPARPCA SQELTTYGFT
APFGKGGDAP LVHVSGDFLL IGTRKEERIL PGSVVRDALK EKVDEIENTQ MRKVYKKERD
QIKDEIVQAF LPRAFIRKSG TFAAIAPKQG LILVDSASAK KAEDLLSTLR EAIGSLPVRP
LSVKIAPTAT LTDWLKTQKA AEGFYVLDEC ELRDTHEDGG VVRCKRQDLT SEEIQLHLST
GKQVTQLSLA WQDKLSFVLD EKLTIKRLRF EDVLQEQAEQ DGGDDALAQQ DASFILMMMT
LVEFLPELFT ALGGEEIPQG I
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